RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MOCS2O96007 188 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 JCHAINP01591 159 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 COL6A2P12110 1019 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 FCGR1AP12314 374 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 HNRNPLP14866 589 aaKnown RBP eCLIP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ATP5F1P24539 256 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 PCSK6P29122 969 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 RAB10P61026 200 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 COL9A2Q14055 689 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 FRG1Q14331 258 aaKnown RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 PSMD5Q16401 504 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 DDIASQ8IXT1 998 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 FSTL5Q8N475 847 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 RYBPQ8N488 228 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ARL10Q8N8L6 244 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TSPAN17Q96FV3 270 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 NACA2Q9H009 215 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 CXorf21Q9HAI6 301 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 CHRAC1Q9NRG0 131 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 SH3PXD2BA1X283 911 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 E7ENX8 843 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 G3V2L1 256 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 H3BNH8 94 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 MAGEB3O15480 346 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 SUPT7LO94864 414 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ALBP02768 609 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 PCSK2P16519 638 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 CKMT2P17540 419 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 CCR10P46092 362 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 GLUD2P49448 558 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TRAP1Q12931 704 aaKnown RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ZBED5Q49AG3 693 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 REP15Q6BDI9 236 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ABRAXAS1Q6UWZ7 409 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 LILRA2Q8N149 483 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 DHRSXQ8N5I4 330 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 OR2T34Q8NGX1 318 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 OR2T3Q8NH03 318 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 FBXO32Q969P5 355 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 KLHL32Q96NJ5 620 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 PLAC1Q9HBJ0 212 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 CSNK1G1Q9HCP0 422 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 PFDN4Q9NQP4 134 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TMPRSS4Q9NRS4 437 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 KLF15Q9UIH9 416 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 RALGAPA2Q2PPJ7 1873 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TTC3P53804 2025 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 DHRS12A0PJE2 317 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 NRP2O60462 931 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 BPNT1O95861 308 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 BCL10O95999 233 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 F9P00740 461 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 FGBP02675 491 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 NFKB1P19838 968 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CD151P48509 253 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 RPL34P49207 117 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 TRAF2Q12933 501 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 APOFQ13790 326 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 POU6F1Q14863 301 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 COX20Q5RI15 118 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 PRMT9Q6P2P2 845 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SPATA6LQ8N4H0 392 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CBR4Q8N4T8 237 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CPSF7Q8N684 471 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 TTC9BQ8N6N2 239 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ARNTL2Q8WYA1 636 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 TMIGD2Q96BF3 282 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 PHF21BQ96EK2 531 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 FUBP3Q96I24 572 aaKnown RBP eCLIP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 IGSF21Q96ID5 467 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 NPY6RQ99463 290 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 MRPL57Q9BQC6 102 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 TRIM62Q9BVG3 475 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 BRD8Q9H0E9 1235 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ADNPQ9H2P0 1102 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 PIGVQ9NUD9 493 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 MTF2Q9Y483 593 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 MFHAS1Q9Y4C4 1052 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 DFFAO00273 331 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF195O14628 629 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 HTRA2O43464 458 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 KDM1AO60341 852 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 EFCAB14O75071 495 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 URODP06132 367 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 RBP1P09455 135 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SYN1P17600 705 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 YWHAQP27348 245 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 STT3AP46977 705 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CCR3P51677 355 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 PLK1P53350 603 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 GPR17Q13304 367 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CBX2Q14781 532 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 PIP4P2Q8N4L2 257 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SPPL2BQ8TCT7 592 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 MOCOSQ96EN8 888 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 VAT1Q99536 393 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 FBXO44Q9H4M3 255 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ABCC13Q9NSE7 274 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms