RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 HLA-DQB2P05538 268 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 AK4P27144 223 aaPredicted RBP9.62□□□□□ -0.87
TARDBP-218ENST00000617172 ALDH4A1P30038 563 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 UGT1A5P35504 534 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 CD86P42081 329 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 POLD2P49005 469 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 SPINT3P49223 89 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 VAC14Q08AM6 782 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 AP1B1Q10567 949 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 SQSTM1Q13501 440 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 TFDP2Q14188 446 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 IHHQ14623 411 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 NR1D2Q14995 579 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 PTPRRQ15256 657 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 SLC14A2Q15849 920 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 PYCR3Q53H96 274 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 CCDC70Q6NSX1 233 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 SLC30A9Q6PML9 568 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 B3GNT8Q7Z7M8 397 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 NT5DC3Q86UY8 548 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 CPNE8Q86YQ8 564 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 GALNT13Q8IUC8 556 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 LPCAT1Q8NF37 534 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 SLC39A7Q92504 469 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 COX14Q96I36 57 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 BBC3Q96PG8 261 aaPredicted RBP9.62□□□□□ -0.87
TARDBP-218ENST00000617172 OR2M4Q96R27 311 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 FAM83DQ9H4H8 585 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 SUDS3Q9H7L9 328 aaPredicted RBP9.62□□□□□ -0.87
TARDBP-218ENST00000617172 MAGEE1Q9HCI5 957 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 LUC7LQ9NQ29 371 aaKnown RBP9.62□□□□□ -0.87
TARDBP-218ENST00000617172 SPTLC3Q9NUV7 552 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 ZNHIT2Q9UHR6 403 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 TMEM98Q9Y2Y6 226 aa9.62□□□□□ -0.87
TARDBP-218ENST00000617172 BPTFQ12830 3046 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 GPR89AB7ZAQ6 455 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 HGSO14964 777 aaPredicted RBP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 CASC3O15234 703 aaKnown RBP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 MTSS1O43312 755 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 SPOPO43791 374 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 ASMTLO95671 621 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 MMP2P08253 660 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 GPR89BP0CG08 455 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 SLC5A2P31639 672 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 ACTR1BP42025 376 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 HADHBP55084 474 aaKnown RBP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 ACTR1AP61163 376 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 GPLD1P80108 840 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 C19orf57Q0VDD7 668 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 TRA2AQ13595 282 aaKnown RBP eCLIP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 QPCTQ16769 361 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 MAP9Q49MG5 647 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 HENMT1Q5T8I9 393 aaKnown RBP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 ARHGAP40Q5TG30 622 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 TMEM164Q5U3C3 297 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 DOK6Q6PKX4 331 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 JAMLQ86YT9 394 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 RFX6Q8HWS3 928 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 SLITRK4Q8IW52 837 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 NAGSQ8N159 534 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 CNTD1Q8N815 330 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 SH3KBP1Q96B97 665 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 IMP4Q96G21 291 aaKnown RBP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 OLFM3Q96PB7 478 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 CCNL2Q96S94 520 aaPredicted RBP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 SLC25A51Q9H1U9 297 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 ZFYVE1Q9HBF4 777 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 SEPT10Q9P0V9 454 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
TARDBP-218ENST00000617172 LOXL2Q9Y4K0 774 aa9.61□□□□□ -0.87
TARDBP-218ENST00000617172 A0A0U1RQS6 177 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 K7ENP7 123 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 PPM1DO15297 605 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 INPP4BO15327 924 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 PSTPIP1O43586 416 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 DNAJC6O75061 913 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.875e-13■□□□□ 10.2
TARDBP-218ENST00000617172 KRT1P04264 644 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 SLC2A4P14672 509 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 CD82P27701 267 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 CD1CP29017 333 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 TNNT3P45378 269 aaPredicted RBP9.6□□□□□ -0.87
TARDBP-218ENST00000617172 NOP2P46087 812 aaKnown RBP9.6□□□□□ -0.87
TARDBP-218ENST00000617172 FASLGP48023 281 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 MAZP56270 477 aaKnown RBP9.6□□□□□ -0.87
TARDBP-218ENST00000617172 OR1D5P58170 312 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 DCDC1P59894 354 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 CDK18Q07002 472 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 ZBTB17Q13105 803 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 TBX2Q13207 712 aaPredicted RBP9.6□□□□□ -0.87
TARDBP-218ENST00000617172 CLN3Q13286 438 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 SPA17Q15506 151 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 AMZ1Q400G9 498 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 TEX44Q53QW1 395 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 TAF1BQ53T94 588 aaPredicted RBP9.6□□□□□ -0.87
TARDBP-218ENST00000617172 PHF19Q5T6S3 580 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 PDPK2PQ6A1A2 396 aa9.6□□□□□ -0.87
TARDBP-218ENST00000617172 INO80CQ6PI98 192 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms