RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 SCAPQ12770 1279 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 ITGADQ13349 1161 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 ZNF678Q5SXM1 525 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 GLB1LQ6UWU2 654 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 ALKAL1Q6UXT8 129 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 KIAA0408Q6ZU52 694 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 SLC15A3Q8IY34 581 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 OR7D4Q8NG98 312 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 OR10Q1Q8NGQ4 319 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 CLHC1Q8NHS4 586 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 ITFG1Q8TB96 612 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 LRRC58Q96CX6 371 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 PPP1R2P1Q96PQ5 205 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 RIC8BQ9NVN3 520 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 BAG5Q9UL15 447 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 DGKBQ9Y6T7 804 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 ARID2Q68CP9 1835 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 H0Y626 953 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 H3BNH8 94 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 OR4F21O95013 312 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 TRIM16O95361 564 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 CYP2C18P33260 490 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 ARCN1P48444 511 aaKnown RBP13.76□□□□□ -0.21
HPS1-215ENST00000613394 GSK3BP49841 420 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 HERVK_113P63132 956 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 PFKPQ01813 784 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 LRP8Q14114 963 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 BRMS1LQ5PSV4 323 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 PTRHD1Q6GMV3 140 aaKnown RBP13.76□□□□□ -0.21
HPS1-215ENST00000613394 ERVK-6Q9BXR3 956 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 MUC3BQ9H195 1237 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 PKP3Q9Y446 797 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 TRPV2Q9Y5S1 764 aa13.76□□□□□ -0.21
HPS1-215ENST00000613394 PLA2G4EQ3MJ16 856 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 CTXN3Q4LDR2 81 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 DENND5AQ6IQ26 1287 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 SPESP1Q6UW49 350 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 RANBP10Q6VN20 620 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 KCTD8Q6ZWB6 473 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 C16orf59Q7L2K0 433 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 ERMP1Q7Z2K6 904 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 CPNE9Q8IYJ1 553 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 GPR78Q96P69 363 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 TRMOQ9BU70 441 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 BDH2Q9BUT1 245 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 TMEM165Q9HC07 324 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 TIMMDC1Q9NPL8 285 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 EXD2Q9NVH0 621 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 EIF2B4Q9UI10 523 aaKnown RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 PADI3Q9ULW8 664 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 USP22Q9UPT9 525 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 PCDHGC4Q9Y5F7 938 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 ORC6Q9Y5N6 252 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 UBFD1O14562 309 aaKnown RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 SLC22A3O75751 556 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 KCNH1O95259 989 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 SNAP29O95721 258 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 ALDOCP09972 364 aaKnown RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 ZNF135P52742 658 aaPredicted RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 DGKQP52824 942 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 TAF2Q6P1X5 1199 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 ISCA2Q86U28 154 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 GPSM1Q86YR5 675 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 CENPNQ96H22 339 aaPredicted RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 SLC30A1Q9Y6M5 507 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 PTPRFP10586 1907 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 B4GAT1O43505 415 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 BCL10O95999 233 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 SEMA3BQ13214 749 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 RFTN1Q14699 578 aaPredicted RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 GLYATQ6IB77 296 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 MAMDC4Q6UXC1 1216 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 HOPXQ9BPY8 73 aaPredicted RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 CHID1Q9BWS9 393 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 GPR63Q9BZJ6 419 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 GSTO2Q9H4Y5 243 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 ZNHIT2Q9UHR6 403 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 EVLQ9UI08 416 aaPredicted RBP13.75□□□□□ -0.21
HPS1-215ENST00000613394 CEPT1Q9Y6K0 416 aa13.75□□□□□ -0.21
HPS1-215ENST00000613394 A0A0J9YVX5 310 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 C2orf81A6NN90 581 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 HS6ST1O60243 411 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 CELF2O95319 508 aaKnown RBP13.74□□□□□ -0.21
HPS1-215ENST00000613394 CNPP09543 421 aaKnown RBP13.74□□□□□ -0.21
HPS1-215ENST00000613394 OCA2Q04671 838 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 DGCR6Q14129 220 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 OR4D1Q15615 310 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 GPR162Q16538 588 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 PRMT9Q6P2P2 845 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 SH3RF2Q8TEC5 729 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 IL12RB2Q99665 862 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 SMPD4Q9NXE4 827 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 IQCF5A8MTL0 148 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 GABRDO14764 452 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 KPNA6O60684 536 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 NIPSNAP2O75323 286 aa13.74□□□□□ -0.21
HPS1-215ENST00000613394 PRDX3P30048 256 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms