RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 NPIPB15A6NHN6 443 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 HTRA2O43464 458 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 ASMTLO95671 621 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 FURINP09958 794 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 EPHA4P54764 986 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 SYCP1Q15431 976 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 TMCO4Q5TGY1 634 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 C6orf15Q6UXA7 325 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 ADAMTSL4Q6UY14 1074 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 ARHGAP12Q8IWW6 846 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 MLKLQ8NB16 471 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 GALNT6Q8NCL4 622 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 SCARF2Q96GP6 870 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 VPS16Q9H269 839 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 DHX35Q9H5Z1 703 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 SARS2Q9NP81 518 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 SEPT11Q9NVA2 429 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 CUEDC1Q9NWM3 386 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 CNOT8Q9UFF9 292 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 KCND3Q9UK17 655 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 PHTF1Q9UMS5 762 aa17.08■□□□□ 0.32
CSNK1E-215ENST00000612795 MED13Q9UHV7 2174 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 EML2O95834 649 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 ZNF28P17035 718 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 SOX5P35711 763 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 RPL7AP62424 266 aaKnown RBP17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 DPTQ07507 201 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 SLC10A7Q0GE19 358 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 CAMK4Q16566 473 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 DCUN1D2Q6PH85 259 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 USP45Q70EL2 814 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 SLC9B2Q86UD5 537 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 TSPAN33Q86UF1 283 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 PHF13Q86YI8 300 aaPredicted RBP17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 PLXDC1Q8IUK5 500 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 NPWQ8N729 165 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 AP2M1Q96CW1 435 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 PCDHB18PQ96TA0 734 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 TWSG1Q9GZX9 223 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 EPB41L1Q9H4G0 881 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 SIDT1Q9NXL6 827 aaKnown RBP17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 ITPR2Q14571 2701 aa17.07■□□□□ 0.32
CSNK1E-215ENST00000612795 HIVEP3Q5T1R4 2406 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 MN1Q10571 1320 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 SEMA7AO75326 666 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 SOD1P00441 154 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 PDGFAP04085 211 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 SLC2A4P14672 509 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 CASP14P31944 242 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 HSPA9P38646 679 aaKnown RBP17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 CLEC16AQ2KHT3 1053 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 RFX8Q6ZV50 586 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 CHST15Q7LFX5 561 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 TMEM135Q86UB9 458 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 RASGRP3Q8IV61 690 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 HERPUD2Q9BSE4 406 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 ABCG8Q9H221 673 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 GANQ9H2C0 597 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 NLRC4Q9NPP4 1024 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 RCOR3Q9P2K3 495 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 ZNHIT2Q9UHR6 403 aa17.06■□□□□ 0.32
CSNK1E-215ENST00000612795 PIPSLA2A3N6 862 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 DNAJB5O75953 348 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 KIAA0754O94854 1291 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 PYGLP06737 847 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 ANKRD34CP0C6C1 535 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 RNF224P0DH78 156 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 CTPS1P17812 591 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 ERCC2P18074 760 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 TNFAIP3P21580 790 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 TRAF2Q12933 501 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 PTPRRQ15256 657 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 CA9Q16790 459 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 MON1BQ7L1V2 547 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 TECPR1Q7Z6L1 1165 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 CBARPQ8N350 705 aaPredicted RBP17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 BBS5Q8N3I7 341 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 SCAMP4Q969E2 229 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 SCRN2Q96FV2 425 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 ZNF599Q96NL3 588 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 MCCC1Q96RQ3 725 aaPredicted RBP17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 TBC1D10AQ9BXI6 508 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 CASS4Q9NQ75 786 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 TBC1D29Q9UFV1 150 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 LNPEPQ9UIQ6 1025 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 KCNK6Q9Y257 313 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 PRKAB1Q9Y478 270 aa17.05■□□□□ 0.32
CSNK1E-215ENST00000612795 SNX2O60749 519 aa17.04■□□□□ 0.32
CSNK1E-215ENST00000612795 CREG1O75629 220 aa17.04■□□□□ 0.32
CSNK1E-215ENST00000612795 NDUFA10O95299 355 aa17.04■□□□□ 0.32
CSNK1E-215ENST00000612795 CCNYL3P0C7X3 344 aa17.04■□□□□ 0.32
CSNK1E-215ENST00000612795 PGDP52209 483 aa17.04■□□□□ 0.32
CSNK1E-215ENST00000612795 GFERP55789 205 aa17.04■□□□□ 0.32
CSNK1E-215ENST00000612795 DNASE1L3Q13609 305 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms