RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RHDQ02161 417 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 LIPEQ05469 1076 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 BFSP2Q13515 415 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 LINGO4Q6UY18 593 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 KBTBD6Q86V97 674 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 HORMAD1Q86X24 394 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 UGT2B28Q9BY64 529 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 RMND5AQ9H871 391 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 NMUR1Q9HB89 426 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 SUCOQ9UBS9 1254 aaKnown RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 RAI2Q9Y5P3 530 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 TLL2Q9Y6L7 1015 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 MOXD2PA6NHM9 499 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 PTGES3LE9PB15 166 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 ADCY6O43306 1168 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 HAPLN1P10915 354 aaPredicted RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 ELNP15502 786 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 NCK1P16333 377 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 POLR2JP52435 117 aaKnown RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 DNAJB13P59910 316 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 BCL2L1Q07817 233 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 PLCL1Q15111 1095 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 TLR1Q15399 786 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 MAPKAPK3Q16644 382 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 TECRLQ5HYJ1 363 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 SPATA19Q7Z5L4 167 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 ADAMTSL2Q86TH1 951 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 AHI1Q8N157 1196 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 KDM1BQ8NB78 822 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 C3orf58Q8NDZ4 430 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 DDHD1Q8NEL9 900 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 OR6K2Q8NGY2 324 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 PGAP3Q96FM1 320 aaPredicted RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 CDKN2AIPNLQ96HQ2 116 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 FUBP3Q96I24 572 aaKnown RBP eCLIP8.65□□□□□ -1.02
LIG4-204ENST00000611712 TMLHEQ9NVH6 421 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 ZNHIT2Q9UHR6 403 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 INVSQ9Y283 1065 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 Q9Y3F1 56 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 HS6ST1O60243 411 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 TRMUO75648 421 aaKnown RBP8.65□□□□□ -1.03
LIG4-204ENST00000611712 OR6B1O95007 311 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 FYNP06241 537 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 HALP42357 657 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 PIK3CGP48736 1102 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 MAPKAPK2P49137 400 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 RAD23AP54725 363 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 TRAP1Q12931 704 aaKnown RBP8.65□□□□□ -1.03
LIG4-204ENST00000611712 MAD2L1Q13257 205 aaPredicted RBP8.65□□□□□ -1.03
LIG4-204ENST00000611712 SYTL3Q4VX76 610 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 MS4A13Q5J8X5 152 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 MAVSQ7Z434 540 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 DEFB128Q7Z7B8 93 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 CPNE9Q8IYJ1 553 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 FEM1CQ96JP0 617 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 OLFM1Q99784 485 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 ALG2Q9H553 416 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 SCN3BQ9NY72 215 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 EIF2B4Q9UI10 523 aaKnown RBP8.65□□□□□ -1.03
LIG4-204ENST00000611712 FKBPLQ9UIM3 349 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 FOCADQ5VW36 1801 aa8.65□□□□□ -1.03
LIG4-204ENST00000611712 ACSL4O60488 711 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 SNAP91O60641 907 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 ULK1O75385 1050 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 CLDN11O75508 207 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 OR4F21O95013 312 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 KCNH1O95259 989 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 PARNO95453 639 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 ESRRBO95718 433 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 OGNP20774 298 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 DGKAP23743 735 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 OR1D2P34982 312 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 PPM1FP49593 454 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 CCT8P50990 548 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 INHBEP58166 350 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 RPS24P62847 133 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 MS4A2Q01362 244 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 ZNF789Q5FWF6 425 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 RGMBQ6NW40 437 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 FAM151BQ6UXP7 276 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 ANKS3Q6ZW76 656 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 ZBTB46Q86UZ6 589 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 LRRTM3Q86VH5 581 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 TBC1D21Q8IYX1 336 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 MRPS31Q92665 395 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 CYP2S1Q96SQ9 504 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 MAGEH1Q9H213 219 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 MRM3Q9HC36 420 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 CNOT6Q9ULM6 557 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 ZFP37Q9Y6Q3 630 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 KIF13BQ9NQT8 1826 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 COL4A5P29400 1685 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 C1orf232A0A0U1RR37 186 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 MYOCOSA0A1B0GUC4 107 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 PDLIM1O00151 329 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 PRMT5O14744 637 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 SEPT4O43236 478 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 RNASEH2AO75792 299 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 H6PDO95479 791 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 OTCP00480 354 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms