RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 PCDHB18PQ96TA0 734 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 SPRY4Q9C004 299 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 GANQ9H2C0 597 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 EPB41L1Q9H4G0 881 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 TAB2Q9NYJ8 693 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 CD84Q9UIB8 345 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 MRPS18BQ9Y676 258 aaKnown RBP17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 MYO9AB2RTY4 2548 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 RELNP78509 3460 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 HTRA2O43464 458 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 CCNYL3P0C7X3 344 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 PSMA2P25787 234 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 EPHA4P54764 986 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 SLC10A7Q0GE19 358 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 TCP11X2Q5H9J9 407 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 C6orf15Q6UXA7 325 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 ADAMTSL4Q6UY14 1074 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 CHST15Q7LFX5 561 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 PLXDC1Q8IUK5 500 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 RASGRP3Q8IV61 690 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 AVL9Q8NBF6 648 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 SCRN2Q96FV2 425 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 NUDCD1Q96RS6 583 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 SARS2Q9NP81 518 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 PCSK1NQ9UHG2 260 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 KCND3Q9UK17 655 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 NOTCH2Q04721 2471 aa17.23■□□□□ 0.35
CHMP4A-211ENST00000609024 CDC14CA4D256 554 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 NPIPB15A6NHN6 443 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 PRPSAP2O60256 369 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 SNX2O60749 519 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 RNF8O76064 485 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 CTPS1P17812 591 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 LHCGRP22888 699 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 HIST2H2BCQ6DN03 193 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 MON1BQ7L1V2 547 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 TRIM74Q86UV6 250 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 EXD1Q8NHP7 514 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 FNIP1Q8TF40 1166 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 SSC4DQ8WTU2 575 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 SPOCK2Q92563 424 aa17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 SCARF2Q96GP6 870 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 SAMSN1Q9NSI8 373 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-211ENST00000609024 SPTBN1Q01082 2364 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 PIPSLA2A3N6 862 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 DLGAP3O95886 979 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 GNLYP22749 145 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 KLK7P49862 253 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 ZNF135P52742 658 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 EPHB1P54762 984 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 JAM2P57087 298 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 RALGPS1Q5JS13 557 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 PPP1R15BQ5SWA1 713 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 TSPAN33Q86UF1 283 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 ARHGAP12Q8IWW6 846 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 GALNT11Q8NCW6 608 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 HERPUD2Q9BSE4 406 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 TWSG1Q9GZX9 223 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 ABCG8Q9H221 673 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 ZWILCHQ9H900 591 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 NOD2Q9HC29 1040 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 CROTQ9UKG9 612 aa17.21■□□□□ 0.35
CHMP4A-211ENST00000609024 OR5K4A6NMS3 321 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 PGLSO95336 258 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 CASP14P31944 242 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 UQCRFS1P47985 274 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 UBE2HP62256 183 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 TRAF2Q12933 501 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 CA9Q16790 459 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 TECPR1Q7Z6L1 1165 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 CBARPQ8N350 705 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 NPWQ8N729 165 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 GALNT6Q8NCL4 622 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 NEK11Q8NG66 645 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 CPT1CQ8TCG5 803 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 KCTD15Q96SI1 283 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 AGPAT1Q99943 283 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 SNRNP25Q9BV90 132 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 PARVAQ9NVD7 372 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 TLK1Q9UKI8 766 aa17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 USP9XQ93008 2570 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-211ENST00000609024 KIR2DS5A0A0G2JLQ3 304 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 A0A0G2JNG1 304 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 KIR2DS3K7RE56 304 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 CCDC172P0C7W6 258 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 ZNF30P17039 623 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 PMS2P54278 862 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 MAXP61244 160 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 ITKQ08881 620 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 KIR2DS5Q14953 304 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 MARC1Q5VT66 337 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 LRRC66Q68CR7 880 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 CAPRIN2Q6IMN6 1127 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 PPP1R2P3Q6NXS1 205 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 CYB5D1Q6P9G0 228 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 IYDQ6PHW0 289 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 LYSMD3Q7Z3D4 306 aa17.19■□□□□ 0.34
CHMP4A-211ENST00000609024 PHYKPLQ8IUZ5 450 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms