RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PAPD5Q8NDF8 572 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR6Q1Q8NGQ2 317 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 LILRB1Q8NHL6 650 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CRYGNQ8WXF5 182 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNX19Q92543 992 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEPT8Q92599 483 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDKL2Q92772 493 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PPP1R14AQ96A00 147 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLCO4A1Q96BD0 722 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FBXL8Q96CD0 374 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 HDAC11Q96DB2 347 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM89AQ96GI7 184 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC39A13Q96H72 371 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 REXO5Q96IC2 774 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 C8orf48Q96LL4 319 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 GLT1D1Q96MS3 346 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 LENG8Q96PV6 779 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLITRK1Q96PX8 696 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ASB2Q96Q27 587 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FIZ1Q96SL8 496 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CPXM1Q96SM3 734 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CSF3RQ99062 836 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CIB1Q99828 191 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SH2D3AQ9BRG2 576 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 REEP2Q9BRK0 252 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 WDR83Q9BRX9 315 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 DCUN1D5Q9BTE7 237 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 C9orf16Q9BUW7 83 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 HERC2P3Q9BVR0 1158 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FTHL17Q9BXU8 183 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC7A5P2Q9GIP4 190 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ST6GALNAC4Q9H4F1 302 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ATP13A3Q9H7F0 1226 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM206Q9H813 350 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 POLR1BQ9H9Y6 1135 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 IFT122Q9HBG6 1241 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRPM3Q9HCF6 1732 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TUFT1Q9NNX1 390 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ALG13Q9NP73 1137 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 NGRNQ9NPE2 291 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACP6Q9NPH0 428 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TCF7L2Q9NQB0 619 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 AGPAT3Q9NRZ7 376 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCM2LQ9NUG4 571 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEPT10Q9P0V9 454 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLEC1BQ9P126 229 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FBLN5Q9UBX5 448 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCSK1NQ9UHG2 260 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 IP6K2Q9UHH9 426 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF639Q9UID6 485 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SERPINB13Q9UIV8 391 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANAPC7Q9UJX3 599 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 NUP50Q9UKX7 468 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CNTN6Q9UQ52 1028 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 GRIP1Q9Y3R0 1128 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SPEF1Q9Y4P9 236 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 KAT6AQ92794 2004 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NHSL1Q5SYE7 1610 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MEGF6O75095 1541 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GAKO14976 1311 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 hCG_1818297A0A087WSY0 165 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 LOC100653049A0A140TA62 436 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PABPN1LA6NDY0 278 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM159BA6NKW6 160 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRIM77I1YAP6 450 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SMIM22K7EJ46 135 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 OVOL3O00110 214 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PSMD11O00231 422 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NOP56O00567 594 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYR61O00622 381 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLIC2O15247 247 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZW10O43264 779 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NDUFA2O43678 99 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZBTB14O43829 449 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NMT2O60551 498 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PLIN3O60664 434 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 FZD7O75084 574 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NDUFS2O75306 463 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GLRA3O75311 464 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ENTPD3O75355 529 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 BCAS1O75363 584 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP7B1O75881 506 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 KRT34O76011 436 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ALDH1A2O94788 518 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RASAL1O95294 804 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 STAMBPO95630 424 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 KRT8P05787 483 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 EPHX1P07099 455 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZSCAN5DPP0CG00 497 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 UMPSP11172 480 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 FCGR1AP12314 374 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 TCN1P20061 433 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MATN1P21941 496 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RBL1P28749 1068 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC16A2P36021 539 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 UGT2B10P36537 528 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 DDOSTP39656 456 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CAPGP40121 348 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 STAT3P40763 770 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms