RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 NFKBIL1Q9UBC1 381 aaPredicted RBP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 TRIM10Q9UDY6 481 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 SUFUQ9UMX1 484 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 GUCA1BQ9UMX6 200 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 ZNF711Q9Y462 761 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 U3KQA8 63 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 ARID1BQ8NFD5 2236 aaPredicted RBP11.48□□□□□ -0.57
CCDC12-209ENST00000604164 FAM149AA5PLN7 773 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 TRABD2BA6NFA1 517 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 TMX2-CTNND1H3BSU7 103 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 KCNN4O15554 427 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 PPFIA2O75334 1257 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 ASMTLO95671 621 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 SOD1P00441 154 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 FGF1P05230 155 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 PNLIPP16233 465 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 GLB1P16278 677 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 CD68P34810 354 aaPredicted RBP11.48□□□□□ -0.57
CCDC12-209ENST00000604164 GNPDA1P46926 289 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 BIRC2Q13490 618 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 ZNF569Q5MCW4 686 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 OGFOD3Q6PK18 319 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 DOK6Q6PKX4 331 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 KDELC1Q6UW63 502 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 GALNT13Q8IUC8 556 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 LRRC8AQ8IWT6 810 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 PELI3Q8N2H9 469 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 TRAM1L1Q8N609 369 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 COX14Q96I36 57 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 PLEKHG4BQ96PX9 1271 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 OR2M4Q96R27 311 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 SPATA16Q9BXB7 569 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 UBP1Q9NZI7 540 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 FEZ2Q9UHY8 353 aaPredicted RBP11.48□□□□□ -0.57
CCDC12-209ENST00000604164 SHOC2Q9UQ13 582 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 PKP3Q9Y446 797 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
CCDC12-209ENST00000604164 A0A0U1RQS6 177 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 INPP4BO15327 924 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
CCDC12-209ENST00000604164 NUDT21O43809 227 aaKnown RBP11.47□□□□□ -0.57
CCDC12-209ENST00000604164 SLC4A1P02730 911 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 CELA2BP08218 269 aaPredicted RBP11.47□□□□□ -0.57
CCDC12-209ENST00000604164 SLC2A4P14672 509 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 HMGCLP35914 325 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 ADCY8P40145 1251 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 PDE1BQ01064 536 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 SPIDRQ14159 915 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 SLC1A5Q15758 541 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 P3H1Q32P28 736 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 C14orf28Q4W4Y0 310 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 ANKRD20A2Q5SQ80 823 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 ANKRD20A1Q5TYW2 823 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 ANKRD20A3Q5VUR7 823 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 CDCP2Q5VXM1 449 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 RBM44Q6ZP01 1051 aaKnown RBP11.47□□□□□ -0.57
CCDC12-209ENST00000604164 RFLNAQ6ZTI6 216 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 GLT6D1Q7Z4J2 308 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 PHYKPLQ8IUZ5 450 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 LSMEM2Q8N112 164 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 KYQ8NBH2 561 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 GPR156Q8NFN8 814 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 DTX3LQ8TDB6 740 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 ANP32BQ92688 251 aaKnown RBP11.47□□□□□ -0.57
CCDC12-209ENST00000604164 SPATA13Q96N96 652 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 SMIM14Q96QK8 99 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 CCDC3Q9BQI4 270 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 ZMIZ1Q9ULJ6 1067 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 PACSIN2Q9UNF0 486 aaPredicted RBP11.47□□□□□ -0.57
CCDC12-209ENST00000604164 AK5Q9Y6K8 562 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 CAPN6Q9Y6Q1 641 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 PTPRBP23467 1997 aa11.47□□□□□ -0.57
CCDC12-209ENST00000604164 C5orf60A6NFR6 353 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 C2orf81A6NN90 581 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 B4DGG1 531 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 PSMD3O43242 534 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 SLC25A14O95258 325 aaPredicted RBP11.46□□□□□ -0.57
CCDC12-209ENST00000604164 PIRTP0C851 137 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 MYF5P13349 255 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 STIP1P31948 543 aaKnown RBP11.46□□□□□ -0.57
CCDC12-209ENST00000604164 ACTN2P35609 894 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 CTBSQ01459 385 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 RTP5Q14D33 572 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 RPS6KA1Q15418 735 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 TCEA2Q15560 299 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 PYCR3Q53H96 274 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 SIRPB2Q5JXA9 342 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 CERCAMQ5T4B2 595 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 ARHGEF18Q6ZSZ5 1173 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 PROSER1Q86XN7 944 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 SLC25A41Q8N5S1 370 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 AVL9Q8NBF6 648 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 TRIM58Q8NG06 486 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 BRSK1Q8TDC3 778 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 ZDHHC1Q8WTX9 485 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 CCDC74AQ96AQ1 378 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 OXNAD1Q96HP4 312 aaPredicted RBP11.46□□□□□ -0.57
CCDC12-209ENST00000604164 MRGPRX2Q96LB1 330 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms