RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 DTX1Q86Y01 620 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAF1-204ENST00000601038 FAF2Q96CS3 445 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 SGF29Q96ES7 293 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 COX14Q96I36 57 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 RIOK2Q9BVS4 552 aaKnown RBP16.9■□□□□ 0.3
SCAF1-204ENST00000601038 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 LCMT1Q9UIC8 334 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 RPL26L1Q9UNX3 145 aaKnown RBP16.9■□□□□ 0.3
SCAF1-204ENST00000601038 PLEKHM1Q9Y4G2 1056 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 TTLL3Q9Y4R7 772 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 PCDHB11Q9Y5F2 797 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 IGHV5-10-1A0A0J9YXX1 117 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 KRT7P08729 469 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 MX2P20592 715 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
SCAF1-204ENST00000601038 GJC1P36383 396 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 LIMK2P53671 638 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 TAS2R40P59535 323 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 SRSF6Q13247 344 aaKnown RBP16.89■□□□□ 0.29
SCAF1-204ENST00000601038 TRA2AQ13595 282 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCAF1-204ENST00000601038 LRP8Q14114 963 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 MANEAQ5SRI9 462 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 TRIM74Q86UV6 250 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 CPNE8Q86YQ8 564 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 PQLC3Q8N755 202 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 OR4D9Q8NGE8 314 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 LYSMD1Q96S90 227 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 AGAP2Q99490 1192 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 DPYSL5Q9BPU6 564 aa16.89■□□□□ 0.29
SCAF1-204ENST00000601038 IGHV1OR21-1A0A087WYE8 117 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-204ENST00000601038 J3QKU1 62 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 ZIC2O95409 532 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-204ENST00000601038 CLDN7O95471 211 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 ITGB2P05107 769 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 HLA-DQB2P05538 268 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 CCL4P13236 92 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 CASP14P31944 242 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 FASLGP48023 281 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 GBE1Q04446 702 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 NIPAL4Q0D2K0 466 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 SLC10A2Q12908 348 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-204ENST00000601038 XKR5Q6UX68 686 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 MARK2Q7KZI7 788 aaKnown RBP16.88■□□□□ 0.29
SCAF1-204ENST00000601038 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 RCBTB1Q8NDN9 531 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 HDAC11Q96DB2 347 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 CCDC74BQ96LY2 380 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 TAAR9Q96RI9 348 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 PCDH9Q9HC56 1237 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 KCNK4Q9NYG8 393 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 IFNKQ9P0W0 207 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 VPS18Q9P253 973 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.88■□□□□ 0.29
SCAF1-204ENST00000601038 HELZ2Q9BYK8 2649 aaKnown RBP16.88■□□□□ 0.29
SCAF1-204ENST00000601038 GCN1Q92616 2671 aaKnown RBP16.88■□□□□ 0.29
SCAF1-204ENST00000601038 KALRNO60229 2985 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 ATMQ13315 3056 aa16.88■□□□□ 0.29
SCAF1-204ENST00000601038 INPP4BO15327 924 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 FGF3P11487 239 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-204ENST00000601038 GPLD1P80108 840 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 SLC18A3Q16572 532 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 LINC00303Q3SY05 128 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 NKAIN2Q5VXU1 208 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 CCDC13Q8IYE1 715 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 CCNYQ8ND76 341 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 LPCAT1Q8NF37 534 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 LRRN4Q8WUT4 740 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 CTNNBL1Q8WYA6 563 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-204ENST00000601038 WDR24Q96S15 920 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 DTLQ9NZJ0 730 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 ZNHIT2Q9UHR6 403 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 CNOT6Q9ULM6 557 aaKnown RBP16.87■□□□□ 0.29
SCAF1-204ENST00000601038 PCDHGA3Q9Y5H0 932 aa16.87■□□□□ 0.29
SCAF1-204ENST00000601038 C1orf232A0A0U1RR37 186 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 ANKRD66B4E2M5 251 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 DNAJC6O75061 913 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 ASMTLO95671 621 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 THRAP10827 490 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 KDELR1P24390 212 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 MAN1A1P33908 653 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 SPINT3P49223 89 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 ZFYVE27Q5T4F4 411 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 TMEM71Q6P5X7 295 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 VASH2Q86V25 355 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 SFRP1Q8N474 314 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 EXD3Q8N9H8 876 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 ZSCAN1Q8NBB4 408 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 AGBL5Q8NDL9 886 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 RAPGEF5Q92565 580 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 RNF157Q96PX1 679 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 MLPHQ9BV36 600 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-204ENST00000601038 PACSIN1Q9BY11 444 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 FAM83DQ9H4H8 585 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 PDP2Q9P2J9 529 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 PCDHGA4Q9Y5G9 962 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms