RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 LRRC49Q8IUZ0 686 aa16.07■□□□□ 0.16
SYDE1-204ENST00000600440 GPR78Q96P69 363 aa16.07■□□□□ 0.16
SYDE1-204ENST00000600440 GAD1Q99259 594 aa16.07■□□□□ 0.16
SYDE1-204ENST00000600440 MLPHQ9BV36 600 aaPredicted RBP16.07■□□□□ 0.16
SYDE1-204ENST00000600440 ASPSCR1Q9BZE9 553 aa16.07■□□□□ 0.16
SYDE1-204ENST00000600440 PCM1Q15154 2024 aa16.07■□□□□ 0.16
SYDE1-204ENST00000600440 COL5A3P25940 1745 aaPredicted RBP16.07■□□□□ 0.16
SYDE1-204ENST00000600440 CITO14578 2027 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 ZNF99A8MXY4 864 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 HACD1B0YJ81 288 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 EEF2KO00418 725 aaKnown RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 PIP5K1BO14986 540 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 MGEA5O60502 916 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 TOMM70O94826 608 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 CASP3P42574 277 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 MTHFRP42898 656 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 ARCN1P48444 511 aaKnown RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 ARPP19P56211 112 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 NOL9Q5SY16 702 aaKnown RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 STEAP3Q658P3 488 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 TXNDC11Q6PKC3 985 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 MPZL3Q6UWV2 235 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 RBM23Q86U06 439 aaKnown RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 CHDHQ8NE62 594 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 OR6Q1Q8NGQ2 317 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 SLC10A4Q96EP9 437 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 HOPXQ9BPY8 73 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 EMILIN2Q9BXX0 1053 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 YTHDF1Q9BYJ9 559 aaKnown RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 LRRC4Q9HBW1 653 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 ZSCAN5BA6NJL1 495 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 SPATA31C2B4DYI2 1134 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 VWA5AO00534 786 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 HOXC11O43248 304 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 DYRK3O43781 588 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 SLC1A2P43004 574 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 FOXA1P55317 472 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 OR4D2P58180 307 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 HIST2H2ACQ16777 129 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 ZNF789Q5FWF6 425 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 MICU2Q8IYU8 434 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 NSUN6Q8TEA1 469 aaKnown RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 NSMCE2Q96MF7 247 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 TMEM134Q9H6X4 195 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 MID1IP1Q9NPA3 183 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 MRGBPQ9NV56 204 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 INTS7Q9NVH2 962 aaKnown RBP16.06■□□□□ 0.16
SYDE1-204ENST00000600440 HACD3Q9P035 362 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 GMIPQ9P107 970 aa16.06■□□□□ 0.16
SYDE1-204ENST00000600440 CRCPO75575 148 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 SOAT2O75908 522 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 MT-CYBP00156 380 aaPredicted RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 TFAP2DQ7Z6R9 452 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 GALNT5Q7Z7M9 940 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 DEFB106AQ8N104 65 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 OR13J1Q8NGT2 312 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 CNDP2Q96KP4 475 aaKnown RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 DEPDC7Q96QD5 511 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 RHNO1Q9BSD3 238 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 DSN1Q9H410 356 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 PAK1IP1Q9NWT1 392 aaPredicted RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 ERVK-18Q9QC07 812 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 CCL22O00626 93 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 DBTP11182 482 aaKnown RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 FMO4P31512 558 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 CXCR3P49682 368 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 KCNAB2Q13303 367 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 AASDHQ4L235 1098 aaPredicted RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 P2RY8Q86VZ1 359 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 MCOLN3Q8TDD5 553 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 CDT1Q9H211 546 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 SHROOM3Q8TF72 1996 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 TTC24A2A3L6 582 aaPredicted RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 ASNSP08243 561 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 STAG3L1P0CL83 205 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 ALDH3A2P51648 485 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 RABGGTBP53611 331 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 EMX1Q04741 257 aaPredicted RBP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 LAPTM4AQ15012 233 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 PAGE3Q5JUK9 113 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 BTBD8Q5XKL5 378 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 GLYATQ6IB77 296 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 CYHR1Q6ZMK1 362 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 LARP4Q71RC2 724 aaKnown RBP eCLIP16.05■□□□□ 0.16
SYDE1-204ENST00000600440 LYSMD2Q8IV50 215 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 PPM1MQ96MI6 270 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 SMOC2Q9H3U7 446 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 DPEP3Q9H4B8 488 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 SNX10Q9Y5X0 201 aa16.05■□□□□ 0.16
SYDE1-204ENST00000600440 SLX4Q8IY92 1834 aa16.04■□□□□ 0.16
SYDE1-204ENST00000600440 PDZK1P1A8MUH7 402 aa16.04■□□□□ 0.16
SYDE1-204ENST00000600440 FAM72CH0Y354 149 aa16.04■□□□□ 0.16
SYDE1-204ENST00000600440 DPYSL4O14531 572 aa16.04■□□□□ 0.16
SYDE1-204ENST00000600440 SSX4O60224 188 aa16.04■□□□□ 0.16
SYDE1-204ENST00000600440 FTH1P02794 183 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms