RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CREBRFQ8IUR6 639 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 PASD1Q8IV76 773 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 IQCKQ8N0W5 287 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 C1orf131Q8NDD1 294 aaKnown RBP17.51■□□□□ 0.39
SSBP4-207ENST00000600244 FDCSPQ8NFU4 85 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 EXOC2Q96KP1 924 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 RUFY1Q96T51 708 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 NCAPGQ9BPX3 1015 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 NUDT9Q9BW91 350 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 TAB2Q9NYJ8 693 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 PCDHGC3Q9UN70 934 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 NEU3Q9UQ49 428 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 PRSS44E7EML9 344 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 EML2O95834 649 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 PRKCSHP14314 528 aaPredicted RBP17.5■□□□□ 0.39
SSBP4-207ENST00000600244 CETN1Q12798 172 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 CRB2Q5IJ48 1285 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 FAM131BQ86XD5 332 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 DNAAF5Q86Y56 855 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 ZDHHC17Q8IUH5 632 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 COQ10AQ96MF6 247 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 GPR87Q9BY21 358 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 BRD8Q9H0E9 1235 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 RBSNQ9H1K0 784 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 NOL6Q9H6R4 1146 aaKnown RBP17.5■□□□□ 0.39
SSBP4-207ENST00000600244 OR12D3Q9UGF7 316 aa17.5■□□□□ 0.39
SSBP4-207ENST00000600244 MN1Q10571 1320 aaPredicted RBP17.49■□□□□ 0.39
SSBP4-207ENST00000600244 NIPBLQ6KC79 2804 aaeCLIP17.49■□□□□ 0.39
SSBP4-207ENST00000600244 LRRTM2O43300 516 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 DIAPH2O60879 1101 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 SPAG6O75602 509 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 MT-ND3P03897 115 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 FGF5P12034 268 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 CDK11BP21127 795 aaKnown RBP17.49■□□□□ 0.39
SSBP4-207ENST00000600244 PTPN4P29074 926 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 EPHA4P54764 986 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 PER3P56645 1201 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 SNX16P57768 344 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 SH3BP2P78314 561 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 HHEXQ03014 270 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 IL10RAQ13651 578 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 DPY19L2P1Q6NXN4 242 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 DPPA4Q7L190 304 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 GDF7Q7Z4P5 450 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 SYVN1Q86TM6 617 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 RASGRP3Q8IV61 690 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 ECHDC3Q96DC8 303 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 OR6C1Q96RD1 312 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 VPS16Q9H269 839 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 AKIRIN1Q9H9L7 192 aaPredicted RBP17.49■□□□□ 0.39
SSBP4-207ENST00000600244 SARS2Q9NP81 518 aaKnown RBP17.49■□□□□ 0.39
SSBP4-207ENST00000600244 LNPEPQ9UIQ6 1025 aa17.49■□□□□ 0.39
SSBP4-207ENST00000600244 LGALS16A8MUM7 142 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 FAM72CH0Y354 149 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 GOLGA6L19H0YKK7 550 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 ZG16O60844 167 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 C9P02748 559 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 HOXB4P17483 251 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-207ENST00000600244 PTGIRP43119 386 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 RPS18P62269 152 aaKnown RBP17.48■□□□□ 0.39
SSBP4-207ENST00000600244 CDK3Q00526 305 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 CFAP58Q5T655 872 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 FAM72AQ5TYM5 149 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 FAM72DQ6L9T8 149 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 TRNP1Q6NT89 227 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 RWDD4Q6NW29 188 aaKnown RBP17.48■□□□□ 0.39
SSBP4-207ENST00000600244 FAM72BQ86X60 149 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 PLXDC1Q8IUK5 500 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 RNF214Q8ND24 703 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 ANKRD20A12PQ8NF67 263 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 C9orf72Q96LT7 481 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 OR2M4Q96R27 311 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 TUBGCP5Q96RT8 1024 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 SMAD5Q99717 465 aaKnown RBP17.48■□□□□ 0.39
SSBP4-207ENST00000600244 UBE2TQ9NPD8 197 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-207ENST00000600244 PCSK5Q92824 1860 aa17.48■□□□□ 0.39
SSBP4-207ENST00000600244 ANKHD1Q8IWZ3 2542 aaKnown RBP17.47■□□□□ 0.39
SSBP4-207ENST00000600244 DCHS2Q6V1P9 2916 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 A0A1B0GTH6 734 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 SSU72P8A0A1W2PR75 194 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 LPOP22079 712 aaPredicted RBP17.47■□□□□ 0.39
SSBP4-207ENST00000600244 PTGER4P35408 488 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 FLT3P36888 993 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 TPM4P67936 248 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 CDK18Q07002 472 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 NFATC2Q13469 925 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 ACOX1Q15067 660 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.47■□□□□ 0.39
SSBP4-207ENST00000600244 CBARPQ8N350 705 aaPredicted RBP17.47■□□□□ 0.39
SSBP4-207ENST00000600244 SH3KBP1Q96B97 665 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 ELMO2Q96JJ3 720 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 MAGEB5Q9BZ81 275 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 EPB41L1Q9H4G0 881 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
SSBP4-207ENST00000600244 PKDREJQ9NTG1 2253 aa17.47■□□□□ 0.39
SSBP4-207ENST00000600244 A8MX80 341 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 LRIG2O94898 1065 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 PON1P27169 355 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 TEAD1P28347 426 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 ADRA1BP35368 520 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms