RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 GORASP1Q9BQQ3 440 aa28.03■■■□□ 2.08
SSBP4-206ENST00000599699 TRABDQ9H4I3 376 aa28.03■■■□□ 2.08
SSBP4-206ENST00000599699 GULP1Q9UBP9 304 aa28.03■■■□□ 2.08
SSBP4-206ENST00000599699 SUFUQ9UMX1 484 aa28.03■■■□□ 2.08
SSBP4-206ENST00000599699 GPR34Q9UPC5 381 aa28.03■■■□□ 2.08
SSBP4-206ENST00000599699 AURKAO14965 403 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 ASMTLO95671 621 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 RPIAP49247 311 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 LVRNQ6Q4G3 990 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 GALNT15Q8N3T1 639 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 GPR26Q8NDV2 337 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 C1orf54Q8WWF1 131 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 LRRC45Q96CN5 670 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 APOL2Q9BQE5 337 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 BOCQ9BWV1 1114 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 TLR10Q9BXR5 811 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 FRMD8P1Q9BZ68 369 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-206ENST00000599699 CDH19Q9H159 772 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 BPIFA1Q9NP55 256 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 HACD3Q9P035 362 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 SIRPGQ9P1W8 387 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 SLC17A4Q9Y2C5 497 aa28.02■■■□□ 2.08
SSBP4-206ENST00000599699 LY6G6EA0A0G2JKS1 128 aa28.01■■■□□ 2.07
SSBP4-206ENST00000599699 CPED1A4D0V7 1026 aa28.01■■■□□ 2.07
SSBP4-206ENST00000599699 ZSCAN12O43309 604 aa28.01■■■□□ 2.07
SSBP4-206ENST00000599699 MARK2Q7KZI7 788 aaKnown RBP28.01■■■□□ 2.07
SSBP4-206ENST00000599699 GLT6D1Q7Z4J2 308 aa28.01■■■□□ 2.07
SSBP4-206ENST00000599699 KCNF1Q9H3M0 494 aa28.01■■■□□ 2.07
SSBP4-206ENST00000599699 MSRB2Q9Y3D2 182 aa28.01■■■□□ 2.07
SSBP4-206ENST00000599699 U3KQA8 63 aa28.01■■■□□ 2.07
SSBP4-206ENST00000599699 FADS2P1A8MWK0 482 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 LIASO43766 372 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 GDF10P55107 478 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 DCDC1P59894 354 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 SNX1Q13596 522 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 PARP6Q2NL67 630 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 ZNF569Q5MCW4 686 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 TMPRSS7Q7RTY8 843 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 SLC35F3Q8IY50 421 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 FAM46DQ8NEK8 389 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 IFI44Q8TCB0 444 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 PTCD2Q8WV60 388 aaKnown RBP28■■■□□ 2.07
SSBP4-206ENST00000599699 COX14Q96I36 57 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 ZSCAN5AQ9BUG6 496 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 ZNF148Q9UQR1 794 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 GPSM3Q9Y4H4 160 aa28■■■□□ 2.07
SSBP4-206ENST00000599699 FUCA1P04066 466 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 ATP1A1P05023 1023 aaKnown RBP27.99■■■□□ 2.07
SSBP4-206ENST00000599699 IVLP07476 585 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 BPIP17213 487 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 E2F1Q01094 437 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 ILF3Q12906 894 aaKnown RBP eCLIP27.99■■■□□ 2.072e-11■■□□□ 11.9
SSBP4-206ENST00000599699 OLIG2Q13516 323 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 SMAD1Q15797 465 aaKnown RBP27.99■■■□□ 2.07
SSBP4-206ENST00000599699 EFL1Q7Z2Z2 1120 aaKnown RBP27.99■■■□□ 2.07
SSBP4-206ENST00000599699 TAB3Q8N5C8 712 aaPredicted RBP27.99■■■□□ 2.07
SSBP4-206ENST00000599699 CCL4L1Q8NHW4 92 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 CNTNAP3BQ96NU0 1288 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 TBL1YQ9BQ87 522 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 GSDMCQ9BYG8 508 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 CNTNAP3Q9BZ76 1288 aa27.99■■■□□ 2.07
SSBP4-206ENST00000599699 CNOT6Q9ULM6 557 aaKnown RBP27.99■■■□□ 2.07
SSBP4-206ENST00000599699 GOLGA4Q13439 2230 aaKnown RBP27.99■■■□□ 2.07
SSBP4-206ENST00000599699 FAM149AA5PLN7 773 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 CEP104O60308 925 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 STIP1P31948 543 aaKnown RBP27.98■■■□□ 2.07
SSBP4-206ENST00000599699 CXCR5P32302 372 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 ADRA1AP35348 466 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 HMGCLP35914 325 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 CLDN6P56747 220 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 SPARCL1Q14515 664 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 P3H1Q32P28 736 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 GUSBP11Q6P575 273 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 RANBP10Q6VN20 620 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 TMPRSS12Q86WS5 348 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 TTC30BQ8N4P2 665 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 TRAM1L1Q8N609 369 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 ARL10Q8N8L6 244 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 KYQ8NBH2 561 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 ABCG4Q9H172 646 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 TRNAU1APQ9NX07 287 aaKnown RBP27.98■■■□□ 2.07
SSBP4-206ENST00000599699 PADI4Q9UM07 663 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 PKP3Q9Y446 797 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 SPEGQ15772 3267 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 LRP4O75096 1905 aa27.98■■■□□ 2.07
SSBP4-206ENST00000599699 CHD8Q9HCK8 2581 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 FAM221BA6H8Z2 402 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 BUD23O43709 281 aaKnown RBP27.97■■■□□ 2.07
SSBP4-206ENST00000599699 USP12O75317 370 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 METTL18O95568 372 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 IFNB1P01574 187 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 FGGP02679 453 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 JUPP14923 745 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 OASLQ15646 514 aaKnown RBP27.97■■■□□ 2.07
SSBP4-206ENST00000599699 HES3Q5TGS1 186 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 MARCH9Q86YJ5 346 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 GALNT13Q8IUC8 556 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 MAIP1Q8WWC4 291 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 OR2M4Q96R27 311 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 DPEP2Q9H4A9 486 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms