RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 GOLGA6AQ9NYA3 693 aa10.96□□□□□ -0.65
GRAMD1A-209ENST00000598580 DTLQ9NZJ0 730 aa10.96□□□□□ -0.65
GRAMD1A-209ENST00000598580 TBC1D29Q9UFV1 150 aa10.96□□□□□ -0.65
GRAMD1A-209ENST00000598580 CHKBQ9Y259 395 aa10.96□□□□□ -0.65
GRAMD1A-209ENST00000598580 USP9YO00507 2555 aaPredicted RBP10.96□□□□□ -0.66
GRAMD1A-209ENST00000598580 RELNP78509 3460 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 A0A087X0T9 212 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 A0A0J9YYE9 177 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 A0A1W2PQ67 120 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 FADS2P1A8MWK0 482 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 NKX2-8O15522 239 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 ARHGAP6O43182 974 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 CLDN7O95471 211 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 TRBC1P01850 177 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 CYP1A2P05177 515 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 MMP2P08253 660 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 FAM228BP0C875 321 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 CYP2A6P11509 494 aaPredicted RBP10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 DESP17661 470 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 CD82P27701 267 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 PBX1P40424 430 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 ARL4AP40617 200 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 CDH6P55285 790 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 GALNT2Q10471 571 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 IQCB1Q15051 598 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 CLPPQ16740 277 aaPredicted RBP10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 RALGPS1Q5JS13 557 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 CCDC183Q5T5S1 534 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 ZNF648Q5T619 568 aaPredicted RBP10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 NCBP2-AS2Q69YL0 99 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 ALG1LQ6GMV1 187 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 PPP1R2P3Q6NXS1 205 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 XKR5Q6UX68 686 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 ARHGAP22Q7Z5H3 698 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 NLRP8Q86W28 1048 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 ATPAF2Q8N5M1 289 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 PQLC3Q8N755 202 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 NIPA2Q8N8Q9 360 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 TEKT4Q8WW24 435 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 MAML1Q92585 1016 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 RNF31Q96EP0 1072 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 ARHGAP9Q9BRR9 750 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 APMAPQ9HDC9 416 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 GEMIN8Q9NWZ8 242 aaKnown RBP10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 KCNK4Q9NYG8 393 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 SEPT10Q9P0V9 454 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 PILRAQ9UKJ1 303 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 NENFQ9UMX5 172 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 SCINQ9Y6U3 715 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 DOPEY2Q9Y3R5 2298 aa10.95□□□□□ -0.66
GRAMD1A-209ENST00000598580 UTP20O75691 2785 aaKnown RBP10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 LOC101059948A0A1B0GTJ6 334 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 EFCAB7A8K855 629 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 A8MU76 341 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 B4E171 279 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 STMND1H3BQB6 276 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 DUX1O43812 170 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 HLA-DQB2P05538 268 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 MYBL1P10243 752 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 GARSP41250 739 aaKnown RBP10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 TSPAN7P41732 249 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 FASLGP48023 281 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 TAS2R40P59535 323 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 GBE1Q04446 702 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 TRA2AQ13595 282 aaKnown RBP eCLIP10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 DPYSL3Q14195 570 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 TMEM71Q6P5X7 295 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 IYDQ6PHW0 289 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 USP45Q70EL2 814 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 ZNF765Q7L2R6 523 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 PTRH1Q86Y79 214 aaKnown RBP10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 UNC5BQ8IZJ1 945 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 CNTD1Q8N815 330 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 AGBL5Q8NDL9 886 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 RTP4Q96DX8 246 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 BPIFA3Q9BQP9 254 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 NUP85Q9BW27 656 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 TDRD1Q9BXT4 1180 aaKnown RBP10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 FAM117AQ9C073 453 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 BRD8Q9H0E9 1235 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 MRPL47Q9HD33 250 aaKnown RBP10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 ARFGAP3Q9NP61 516 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 RBM22Q9NW64 420 aaKnown RBP eCLIP10.94□□□□□ -0.669e-7■■■□□ 15.2
GRAMD1A-209ENST00000598580 SLC39A1Q9NY26 324 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 SCHIP1Q9P0W5 487 aaPredicted RBP10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 KCNK6Q9Y257 313 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 PCDHB11Q9Y5F2 797 aa10.94□□□□□ -0.66
GRAMD1A-209ENST00000598580 MATN3O15232 486 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 RAD1O60671 282 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 SRSF1Q07955 248 aaKnown RBP eCLIP10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 ITKQ08881 620 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 NFATC2Q13469 925 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 PIGHQ14442 188 aaPredicted RBP10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 PAFAH1B3Q15102 231 aaKnown RBP10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 QPCTQ16769 361 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 COLEC12Q5KU26 742 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 SNAP47Q5SQN1 464 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 ATP1A1-AS1Q5TC04 95 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 TMEM164Q5U3C3 297 aa10.93□□□□□ -0.66
GRAMD1A-209ENST00000598580 ATG14Q6ZNE5 492 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms