RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ZNF574Q6ZN55 896 aaPredicted RBP16.94■□□□□ 0.3
CCDC9-202ENST00000595659 B4GALNT4Q76KP1 1039 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 ZFAND4Q86XD8 727 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 ZNF761Q86XN6 746 aaPredicted RBP16.94■□□□□ 0.3
CCDC9-202ENST00000595659 CCDC13Q8IYE1 715 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 OR8K1Q8NGG5 319 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 TTC9Q92623 222 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 RNF157Q96PX1 679 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 CMKLR1Q99788 373 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 FOXJ2Q9P0K8 574 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 ZNHIT2Q9UHR6 403 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 HEY1Q9Y5J3 304 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 PTPRQQ9UMZ3 2332 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 MGAQ8IWI9 3026 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 ANKRD36A6QL64 1941 aa16.94■□□□□ 0.3
CCDC9-202ENST00000595659 C1orf232A0A0U1RR37 186 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 LRRD1A4D1F6 860 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 AKR1B10O60218 316 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 CPNE6O95741 557 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 EML2O95834 649 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 TPM3P06753 285 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 MMP2P08253 660 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 TMEM253P0C7T8 217 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 CCL4P13236 92 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 TNNT1P13805 278 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 MX2P20592 715 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 CES1P23141 567 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 ZBTB17Q13105 803 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 QPCTQ16769 361 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 PYCR3Q53H96 274 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 ZNF765Q7L2R6 523 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 KDELC2Q7Z4H8 507 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 ZNF438Q7Z4V0 828 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 SLC35G2Q8TBE7 412 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 SNRNP27Q8WVK2 155 aaKnown RBP16.93■□□□□ 0.3
CCDC9-202ENST00000595659 SCARF2Q96GP6 870 aaPredicted RBP16.93■□□□□ 0.3
CCDC9-202ENST00000595659 WDR24Q96S15 920 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 CHP1Q99653 195 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 CDH19Q9H159 772 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 SPTLC3Q9NUV7 552 aa16.93■□□□□ 0.3
CCDC9-202ENST00000595659 OAS3Q9Y6K5 1087 aaKnown RBP16.93■□□□□ 0.3
CCDC9-202ENST00000595659 LRP4O75096 1905 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 C9orf172C9J069 976 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 NVLO15381 856 aaKnown RBP16.92■□□□□ 0.3
CCDC9-202ENST00000595659 MAN1A1P33908 653 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 PPM1FP49593 454 aaPredicted RBP16.92■□□□□ 0.3
CCDC9-202ENST00000595659 GALNT3Q14435 633 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 NPNTQ6UXI9 565 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 VASH2Q86V25 355 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 GALNT13Q8IUC8 556 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 NRSN1Q8IZ57 195 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 PLD5Q8N7P1 536 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 CNTD1Q8N815 330 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 EXD1Q8NHP7 514 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 JPH3Q8WXH2 748 aaPredicted RBP16.92■□□□□ 0.3
CCDC9-202ENST00000595659 FATE1Q969F0 183 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 HDAC11Q96DB2 347 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 COX14Q96I36 57 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 CCDC74BQ96LY2 380 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 DNAJC7Q99615 494 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 MLPHQ9BV36 600 aaPredicted RBP16.92■□□□□ 0.3
CCDC9-202ENST00000595659 BRD8Q9H0E9 1235 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 ARFGAP3Q9NP61 516 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 HAUS2Q9NVX0 235 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 SEPT10Q9P0V9 454 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 CNOT6Q9ULM6 557 aaKnown RBP16.92■□□□□ 0.3
CCDC9-202ENST00000595659 HYOU1Q9Y4L1 999 aa16.92■□□□□ 0.3
CCDC9-202ENST00000595659 IGHV5-10-1A0A0J9YXX1 117 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 FADS2P1A8MWK0 482 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 PIRTP0C851 137 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 CA4P22748 312 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 SPINT3P49223 89 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 PPIDQ08752 370 aaKnown RBP16.91■□□□□ 0.3
CCDC9-202ENST00000595659 AP1B1Q10567 949 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 ZNF648Q5T619 568 aaPredicted RBP16.91■□□□□ 0.3
CCDC9-202ENST00000595659 CHST15Q7LFX5 561 aaPredicted RBP16.91■□□□□ 0.3
CCDC9-202ENST00000595659 ZNF605Q86T29 641 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 NLRP8Q86W28 1048 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.91■□□□□ 0.3
CCDC9-202ENST00000595659 TMEM159Q96B96 161 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 ZNF830Q96NB3 372 aaPredicted RBP16.91■□□□□ 0.3
CCDC9-202ENST00000595659 AGAP3Q96P47 875 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 ZNHIT6Q9NWK9 470 aaKnown RBP16.91■□□□□ 0.3
CCDC9-202ENST00000595659 TMEM9Q9P0T7 183 aa16.91■□□□□ 0.3
CCDC9-202ENST00000595659 IGHV1OR21-1A0A087WYE8 117 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 C3orf70A6NLC5 250 aaPredicted RBP16.9■□□□□ 0.3
CCDC9-202ENST00000595659 ANKRD66B4E2M5 251 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 DNAJC6O75061 913 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 SLC4A1P02730 911 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 LIPCP11150 499 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 CSF2RBP32927 897 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 GPR3P46089 330 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 RPL26P61254 145 aaKnown RBP16.9■□□□□ 0.3
CCDC9-202ENST00000595659 DYNLT1P63172 113 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 NR1D2Q14995 579 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 LLGL1Q15334 1064 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 ALS2CLQ60I27 953 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 LYSMD3Q7Z3D4 306 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 RFX6Q8HWS3 928 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms