RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 STAP1Q9ULZ2 295 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 LOXL2Q9Y4K0 774 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 LRP4O75096 1905 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 CFAP69A5D8W1 941 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 APOL1O14791 398 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 RAD51BO15315 384 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 SPINT1O43278 529 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 ATP9BO43861 1147 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 MOCS2O96007 188 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 PAK4O96013 591 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 CTSLP07711 333 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 ABHD2P08910 425 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TFE3P19532 575 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 L1CAMP32004 1257 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 RABIFP47224 123 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 AIF1P55008 147 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 YWHAZP63104 245 aaKnown RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 CCL7P80098 99 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 C1orf61Q13536 156 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 KRT81Q14533 505 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 CA9Q16790 459 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 ANKRD20A8PQ5CZ79 823 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TNFAIP8L3Q5GJ75 292 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TPRG1LQ5T0D9 272 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 BEND5Q7L4P6 421 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 RBFAQ8N0V3 343 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 PLD5Q8N7P1 536 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 JPH3Q8WXH2 748 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 USP7Q93009 1102 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 NTAN1Q96AB6 310 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 HAUS1Q96CS2 278 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TMEM74Q96NL1 305 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 ROPN1BQ9BZX4 212 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 ROPN1Q9HAT0 212 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 POPDC2Q9HBU9 364 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TMPRSS4Q9NRS4 437 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 RRN3Q9NYV6 651 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
SCAF1-202ENST00000595242 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 SLC25A13Q9UJS0 675 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 AP4E1Q9UPM8 1137 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 TLR6Q9Y2C9 796 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 POLQO75417 2590 aa12.88□□□□□ -0.35
SCAF1-202ENST00000595242 A0A1W2PQM1 296 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 LMO7DNF2Z398 122 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 YY2O15391 372 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 AGFG2O95081 481 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 TTC4O95801 387 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 RPLP0P05388 317 aaKnown RBP12.87□□□□□ -0.35
SCAF1-202ENST00000595242 ANXA6P08133 673 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 RBP3P10745 1247 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 ZFXP17010 805 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-202ENST00000595242 ETV5P41161 510 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 CD97P48960 835 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 SULT1E1P49888 294 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 RIPPLY3P57055 190 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 DYNLT1P63172 113 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 RPS21P63220 83 aaKnown RBP12.87□□□□□ -0.35
SCAF1-202ENST00000595242 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
SCAF1-202ENST00000595242 MMRN1Q13201 1228 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 XRCC4Q13426 336 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 FGL2Q14314 439 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 KRT71Q3SY84 523 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 RAP1GAP2Q684P5 730 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 SCYL2Q6P3W7 929 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 PCDH19Q8TAB3 1148 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 C9orf43Q8TAL5 461 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-202ENST00000595242 P3H4Q92791 437 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 RNF34Q969K3 372 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 CCDC74AQ96AQ1 378 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 MAK16Q9BXY0 300 aaKnown RBP12.87□□□□□ -0.35
SCAF1-202ENST00000595242 DYRK4Q9NR20 520 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 NINJ2Q9NZG7 142 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 GULP1Q9UBP9 304 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 APOBEC3BQ9UH17 382 aaKnown RBP12.87□□□□□ -0.35
SCAF1-202ENST00000595242 FZD10Q9ULW2 581 aa12.87□□□□□ -0.35
SCAF1-202ENST00000595242 C9orf172C9J069 976 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 RNF103O00237 685 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 FPGTO14772 594 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 EIF3HO15372 352 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCAF1-202ENST00000595242 MTSS1O43312 755 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 LTFP02788 710 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 SHBGP04278 402 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 FYNP06241 537 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 NR1D1P20393 614 aa12.86□□□□□ -0.35
SCAF1-202ENST00000595242 TACR2P21452 398 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms