RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 CYP4F3Q08477 520 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 XRCC4Q13426 336 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 PCSK7Q16549 785 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 PERM1Q5SV97 790 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 CCDC181Q5TID7 509 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 CDCP2Q5VXM1 449 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 LYSMD3Q7Z3D4 306 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 ZNF605Q86T29 641 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 SPATA22Q8NHS9 363 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 HTR3CQ8WXA8 447 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 AGAP2Q99490 1192 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 VAT1Q99536 393 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 RIOK2Q9BVS4 552 aaKnown RBP15.04■□□□□ -0
TRIM28-205ENST00000595028 OSBPL8Q9BZF1 889 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 TMEM168Q9H0V1 697 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 CARS2Q9HA77 564 aaKnown RBP15.04■□□□□ -0
TRIM28-205ENST00000595028 PKD2L2Q9NZM6 624 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 SIRPGQ9P1W8 387 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 GPR34Q9UPC5 381 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 ATMQ13315 3056 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 ATXN7O15265 892 aaPredicted RBP15.03■□□□□ -0
TRIM28-205ENST00000595028 PMPCBO75439 489 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 NDST3O95803 873 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 MT-CO3P00414 261 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 IVLP07476 585 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 SPINT3P49223 89 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 OTUD4Q01804 1114 aaKnown RBP15.03■□□□□ -0
TRIM28-205ENST00000595028 HENMT1Q5T8I9 393 aaKnown RBP15.03■□□□□ -0
TRIM28-205ENST00000595028 DOK6Q6PKX4 331 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 PEX26Q7Z412 305 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 KDELC2Q7Z4H8 507 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 TAF8Q7Z7C8 310 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 TRIM74Q86UV6 250 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 SYCE1Q8N0S2 351 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 ZNF567Q8N184 647 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 ACTL9Q8TC94 416 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 CCHCR1Q8TD31 782 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 PTCD2Q8WV60 388 aaKnown RBP15.03■□□□□ -0
TRIM28-205ENST00000595028 GULP1Q9UBP9 304 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 AMFRQ9UKV5 643 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 PADI4Q9UM07 663 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 SUFUQ9UMX1 484 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 ZNF711Q9Y462 761 aa15.03■□□□□ -0
TRIM28-205ENST00000595028 RGSL1A5PLK6 1076 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 MIF4GDA9UHW6 222 aaKnown RBP15.02■□□□□ -0
TRIM28-205ENST00000595028 FUCA1P04066 466 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 PIRTP0C851 137 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 CETN2P41208 172 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 ABCG1P45844 678 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 GNPDA1P46926 289 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 POLD2P49005 469 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 ILF3Q12906 894 aaKnown RBP eCLIP15.02■□□□□ -0
TRIM28-205ENST00000595028 KDELC1Q6UW63 502 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 CDKL3Q8IVW4 592 aaPredicted RBP15.02■□□□□ -0
TRIM28-205ENST00000595028 GPR156Q8NFN8 814 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 CCL4L1Q8NHW4 92 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 EID2BQ96D98 161 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 OXNAD1Q96HP4 312 aaPredicted RBP15.02■□□□□ -0
TRIM28-205ENST00000595028 COX14Q96I36 57 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 HIC2Q96JB3 615 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 DEPDC7Q96QD5 511 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 FCRL5Q96RD9 977 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 WDR24Q96S15 920 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 GSDMCQ9BYG8 508 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 ABCG4Q9H172 646 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 SUDS3Q9H7L9 328 aaPredicted RBP15.02■□□□□ -0
TRIM28-205ENST00000595028 ZFYVE1Q9HBF4 777 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 MAGEE1Q9HCI5 957 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 TRNAU1APQ9NX07 287 aaKnown RBP15.02■□□□□ -0
TRIM28-205ENST00000595028 UBP1Q9NZI7 540 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 NFKBIL1Q9UBC1 381 aaPredicted RBP15.02■□□□□ -0
TRIM28-205ENST00000595028 FAM153AQ9UHL3 310 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 CAPN6Q9Y6Q1 641 aa15.02■□□□□ -0
TRIM28-205ENST00000595028 MGAQ8IWI9 3026 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 FADS2P1A8MWK0 482 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 B4DGG1 531 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 F5H423 210 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-205ENST00000595028 H7C0C1 242 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 INPP4BO15327 924 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 NOBOXO60393 691 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 FTCDO95954 541 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 SLC4A1P02730 911 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 PYGMP11217 842 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 RBL1P28749 1068 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 ATP5OP48047 213 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 WNT3AP56704 352 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 DCDC1P59894 354 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 CCDC70Q6NSX1 233 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 AADACL2Q6P093 401 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 NRROSQ86YC3 692 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 ZNF843Q8N446 348 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 UBL4BQ8N7F7 174 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 FAM46DQ8NEK8 389 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 GPBAR1Q8TDU6 330 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 CCDC74AQ96AQ1 378 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 SCARF2Q96GP6 870 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-205ENST00000595028 DCBLD2Q96PD2 775 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 OR2M4Q96R27 311 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 CCDC3Q9BQI4 270 aa15.01□□□□□ -0.01
TRIM28-205ENST00000595028 NRSN2Q9GZP1 204 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms