RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CBX2Q14781 532 aaPredicted RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 CYP51A1Q16850 503 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 PDCD4Q53EL6 469 aaKnown RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 ZNF773Q6PK81 442 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 KCTD8Q6ZWB6 473 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 DPP9Q86TI2 863 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 ZBTB8BQ8NAP8 495 aaPredicted RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 OR13F1Q8NGS4 319 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TUBGCP3Q96CW5 907 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 CDCA5Q96FF9 252 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 KCTD14Q9BQ13 255 aaPredicted RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 C1QTNF3Q9BXJ4 246 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 BRINP2Q9C0B6 783 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 AIG1Q9NVV5 245 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 GNPTGQ9UJJ9 305 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 SLC30A1Q9Y6M5 507 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 KERAO60938 352 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 ZNF37AP17032 561 aaPredicted RBP13.19□□□□□ -0.3
VRK3-209ENST00000594948 CD86P42081 329 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 SLC5A3P53794 718 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 MLLT6P55198 1093 aaPredicted RBP13.19□□□□□ -0.3
VRK3-209ENST00000594948 CDH13P55290 713 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 PHEXP78562 749 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 LIPEQ05469 1076 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 CRY1Q16526 586 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 AARS2Q5JTZ9 985 aaKnown RBP13.19□□□□□ -0.3
VRK3-209ENST00000594948 MARC1Q5VT66 337 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 GPR107Q5VW38 600 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 MRNIPQ6NTE8 343 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 OR6P1Q8NGX9 317 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 BPIFB1Q8TDL5 484 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 ZC3H15Q8WU90 426 aaKnown RBP13.19□□□□□ -0.3
VRK3-209ENST00000594948 KIAA1191Q96A73 305 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 FBXL20Q96IG2 436 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 RDH12Q96NR8 316 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 NOL6Q9H6R4 1146 aaKnown RBP13.19□□□□□ -0.3
VRK3-209ENST00000594948 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 SYTL2Q9HCH5 934 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 MARCH4Q9P2E8 410 aaPredicted RBP13.19□□□□□ -0.3
VRK3-209ENST00000594948 B3GNT3Q9Y2A9 372 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 TIMM13Q9Y5L4 95 aaPredicted RBP13.19□□□□□ -0.3
VRK3-209ENST00000594948 HS3ST4Q9Y661 456 aa13.19□□□□□ -0.3
VRK3-209ENST00000594948 INPP4BO15327 924 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 TREHO43280 583 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 LDB2O43679 373 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 TULP3O75386 442 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 PRSS23O95084 383 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 GLP2RO95838 553 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 RPS17P08708 135 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 RHOQP17081 205 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 BDNFP23560 247 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 RPL10P27635 214 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 ZFP36L2P47974 494 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 ARSDP51689 593 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 C21orf59P57076 290 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 TIAL1Q01085 375 aaKnown RBP eCLIP13.18□□□□□ -0.3
VRK3-209ENST00000594948 EMX2Q04743 252 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 CLCQ05315 142 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 CAPRIN1Q14444 709 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 OR4D1Q15615 310 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 GEN1Q17RS7 908 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 GREB1Q4ZG55 1949 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SIRPB2Q5JXA9 342 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ZNF549Q6P9A3 640 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 MOB2Q70IA6 237 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 KDELC2Q7Z4H8 507 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 PIM3Q86V86 326 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 DDHD1Q8NEL9 900 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 PLEKHA8Q96JA3 519 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 MAGED4Q96JG8 741 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SLC30A3Q99726 388 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 DCUN1D5Q9BTE7 237 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 PAIP1Q9H074 479 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 NT5MQ9NPB1 228 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ZIM2Q9NZV7 527 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 DSEQ9UL01 958 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SOBPA7XYQ1 873 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 STX16O14662 325 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 DYNC1LI2O43237 492 aaPredicted RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 TPST1O60507 370 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SEC14L2O76054 403 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 BAIAP3O94812 1187 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SEC24DO94855 1032 aaPredicted RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 ZBTB7AO95365 584 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ESRRBO95718 433 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 HPRP00739 348 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ALBP02768 609 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms