RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TRABDQ9H4I3 376 aa17.65■□□□□ 0.42
SHKBP1-204ENST00000594862 RMI1Q9H9A7 625 aa17.65■□□□□ 0.42
SHKBP1-204ENST00000594862 SIRPGQ9P1W8 387 aa17.65■□□□□ 0.42
SHKBP1-204ENST00000594862 AMFRQ9UKV5 643 aa17.65■□□□□ 0.42
SHKBP1-204ENST00000594862 SUFUQ9UMX1 484 aa17.65■□□□□ 0.42
SHKBP1-204ENST00000594862 AK5Q9Y6K8 562 aa17.65■□□□□ 0.42
SHKBP1-204ENST00000594862 GRID2IPA4D2P6 1211 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 GPR89AB7ZAQ6 455 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 TMX2-CTNND1H3BSU7 103 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 PTMAP06454 111 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 GPR89BP0CG08 455 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 HOXB3P14651 431 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 GLB1P16278 677 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 GNPDA1P46926 289 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 CLDN6P56747 220 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 ADCY2Q08462 1091 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 MPP3Q13368 585 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 HENMT1Q5T8I9 393 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 LYSMD3Q7Z3D4 306 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 GALNT13Q8IUC8 556 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 SPC24Q8NBT2 197 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 CCDC74AQ96AQ1 378 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 COX14Q96I36 57 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 FCRL5Q96RD9 977 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 ZSCAN5AQ9BUG6 496 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 HEMGNQ9BXL5 484 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 GPR63Q9BZJ6 419 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 DPEP2Q9H4A9 486 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 HACD3Q9P035 362 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 APPL1Q9UKG1 709 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 ZNF711Q9Y462 761 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 DUSP10Q9Y6W6 482 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 CELSR3Q9NYQ7 3312 aa17.64■□□□□ 0.41
SHKBP1-204ENST00000594862 MACROD2A1Z1Q3 448 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 GOLGA6L9A6NEM1 432 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 B4DGG1 531 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 H7C0C1 242 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 NUDT21O43809 227 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 PMPCBO75439 489 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 ANXA9O76027 345 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 NFKB1P19838 968 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 HLA-DPA1P20036 260 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 ACTN2P35609 894 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 ATP5OP48047 213 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 LLGL1Q15334 1064 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 TCEA2Q15560 299 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 ISXQ2M1V0 245 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 ZNF569Q5MCW4 686 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 PERM1Q5SV97 790 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 CERCAMQ5T4B2 595 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 ZDHHC20Q5W0Z9 365 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 KCTD16Q68DU8 428 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 DOK6Q6PKX4 331 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 PID1Q7Z2X4 250 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 RNF10Q8N5U6 811 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 TTC13Q8NBP0 860 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 CCDC112Q8NEF3 446 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 SPATA22Q8NHS9 363 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 LRRC45Q96CN5 670 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 SMIM14Q96QK8 99 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 RSPH14Q9UHP6 348 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 KNTC1P50748 2209 aa17.63■□□□□ 0.41
SHKBP1-204ENST00000594862 MT-CYBP00156 380 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 ADCY8P40145 1251 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 MLLT3P42568 568 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 CLPPQ16740 277 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 RFLNAQ6ZTI6 216 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 TMC3Q7Z5M5 1100 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 ZNF567Q8N184 647 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 TRAM1L1Q8N609 369 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 ACTL9Q8TC94 416 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 PLEKHG4BQ96PX9 1271 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 FSD1LQ9BXM9 530 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 GBA3Q9H227 469 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 TAAR2Q9P1P5 351 aa17.62■□□□□ 0.41
SHKBP1-204ENST00000594862 ITPR1Q14643 2758 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 A0A0U1RQS6 177 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 LOC285095A0A1B0GVY8 99 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 TAF4O00268 1085 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 NTN3O00634 580 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 NOBOXO60393 691 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 USP12O75317 370 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 DXOO77932 396 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 ASMTLO95671 621 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 FGF1P05230 155 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 CD68P34810 354 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 LSSP48449 732 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 GEMP55040 296 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 WNT3AP56704 352 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 EIF3EP60228 445 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 OTUD4Q01804 1114 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 EIF3IQ13347 325 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 BIRC2Q13490 618 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 COL9A2Q14055 689 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 PRPSAP1Q14558 356 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 PYCR3Q53H96 274 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 IGF2-ASQ6U949 168 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 KDELC1Q6UW63 502 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms