RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC17A4Q9Y2C5 497 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 PPM1DO15297 605 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 MFAP3LO75121 409 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 IVLP07476 585 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 THRAP10827 490 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 CTPS1P17812 591 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 CR2P20023 1033 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 MPSTP25325 297 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 TEAD1P28347 426 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 SERPINB6P35237 376 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 MMP13P45452 471 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 CDH6P55285 790 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 PIGHQ14442 188 aaPredicted RBP14.67□□□□□ -0.06
PNKP-202ENST00000593706 CLCA4Q14CN2 919 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 SLC18A3Q16572 532 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 RALGPS1Q5JS13 557 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 BORAQ6PGQ7 559 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 MARK2Q7KZI7 788 aaKnown RBP14.67□□□□□ -0.06
PNKP-202ENST00000593706 NRSN1Q8IZ57 195 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 CACNA2D3Q8IZS8 1091 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 OR8K1Q8NGG5 319 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 FAM71BQ8TC56 605 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 TEKT4Q8WW24 435 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 NKD1Q969G9 470 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 AHCYL2Q96HN2 611 aaKnown RBP14.67□□□□□ -0.06
PNKP-202ENST00000593706 DPYSL5Q9BPU6 564 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 DDA1Q9BW61 102 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 PACSIN1Q9BY11 444 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 ASPSCR1Q9BZE9 553 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 SLC25A18Q9H1K4 315 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 GEMIN8Q9NWZ8 242 aaKnown RBP14.67□□□□□ -0.06
PNKP-202ENST00000593706 SLC39A1Q9NY26 324 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 ANAPC7Q9UJX3 599 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 PCDHGA3Q9Y5H0 932 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 ST14Q9Y5Y6 855 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 B3GALT1Q9Y5Z6 326 aa14.67□□□□□ -0.06
PNKP-202ENST00000593706 UTP20O75691 2785 aaKnown RBP14.67□□□□□ -0.06
PNKP-202ENST00000593706 IGHV1OR21-1A0A087WYE8 117 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 SSU72P8A0A1W2PR75 194 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 CYSRT1A8MQ03 144 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 DUX1O43812 170 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 MAFKO60675 156 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 PGLSO95336 258 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 RARAP10276 462 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 LIFP15018 202 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 AMPD1P23109 780 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 UGT1A3P35503 534 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 ARSDP51689 593 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 EPHB1P54762 984 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 GPLD1P80108 840 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 ITKQ08881 620 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 TBX2Q13207 712 aaPredicted RBP14.66□□□□□ -0.06
PNKP-202ENST00000593706 PTPRRQ15256 657 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 BOLA3Q53S33 107 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 CCDC122Q5T0U0 273 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 DCAF12Q5T6F0 453 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 MARC1Q5VT66 337 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 LRRC66Q68CR7 880 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 SARM1Q6SZW1 724 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 POLNQ7Z5Q5 900 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 TRIM74Q86UV6 250 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 CPNE8Q86YQ8 564 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 GALNT13Q8IUC8 556 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 NDUFAF2Q8N183 169 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 AP2M1Q96CW1 435 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 SCRN2Q96FV2 425 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 CSPG4P5Q96PW8 444 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 MCCC1Q96RQ3 725 aaPredicted RBP14.66□□□□□ -0.06
PNKP-202ENST00000593706 SLC38A3Q99624 504 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 SLC12A9Q9BXP2 914 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 ADNPQ9H2P0 1102 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 ABHD10Q9NUJ1 306 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 ETNK2Q9NVF9 386 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 TMEM9Q9P0T7 183 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 IP6K2Q9UHH9 426 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 TMEM98Q9Y2Y6 226 aa14.66□□□□□ -0.06
PNKP-202ENST00000593706 EFCAB7A8K855 629 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 PEX11BO96011 259 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 IL4RP24394 825 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 ARSEP51690 589 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 POLE2P56282 527 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 RAB15P59190 212 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 TLE1Q04724 770 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 DPTQ07507 201 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 KCNAB2Q13303 367 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 SNAP47Q5SQN1 464 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 ADAMTSL4Q6UY14 1074 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 ZNF761Q86XN6 746 aaPredicted RBP14.65□□□□□ -0.06
PNKP-202ENST00000593706 OR10G6Q8NH81 332 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 ABCG8Q9H221 673 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 STN1Q9H668 368 aaKnown RBP14.65□□□□□ -0.06
PNKP-202ENST00000593706 PCDH18Q9HCL0 1135 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 NT5MQ9NPB1 228 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 OCIAD1Q9NX40 245 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 PLEKHM1Q9Y4G2 1056 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 TTLL3Q9Y4R7 772 aa14.65□□□□□ -0.06
PNKP-202ENST00000593706 PRRC2CQ9Y520 2896 aaKnown RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 A0A0U1RQS6 177 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 ZNF891A8MT65 544 aaPredicted RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 RAD1O60671 282 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms