RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 PCDHGA7Q9Y5G6 932 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 CCDC187A0A096LP49 1063 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 AKR1B15C9JRZ8 316 aaPredicted RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 SOD1P00441 154 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 FUCA1P04066 466 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 CA4P22748 312 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 SLC1A1P43005 524 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 EPHB1P54762 984 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 RPL26P61254 145 aaKnown RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 IFI35P80217 286 aaPredicted RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 PTSQ03393 145 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 FOXR1Q6PIV2 292 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 RFLNAQ6ZTI6 216 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 CCNYQ8ND76 341 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 FAM46DQ8NEK8 389 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 CCL4L1Q8NHW4 92 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 GPBAR1Q8TDU6 330 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 LIN37Q96GY3 246 aaPredicted RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 LYSMD1Q96S90 227 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 ABCG8Q9H221 673 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 CARS2Q9HA77 564 aaKnown RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 MOSPD1Q9UJG1 213 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 DNPEPQ9ULA0 475 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 RPL26L1Q9UNX3 145 aaKnown RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 SLC17A4Q9Y2C5 497 aa13.15□□□□□ -0.3
H3F3B-213ENST00000593254 TEP1Q99973 2627 aaKnown RBP13.15□□□□□ -0.3
H3F3B-213ENST00000593254 ITPR2Q14571 2701 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 A0A1W2PQM1 296 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 GOLGA6BA6NDN3 693 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 D6RAR5 112 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 KCNK1O00180 336 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 JCHAINP01591 159 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 MMP2P08253 660 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 SFTPCP11686 197 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 GLB1P16278 677 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 SLC5A2P31639 672 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 STC1P52823 247 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 INHBCP55103 352 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 ZBTB17Q13105 803 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 SRSF6Q13247 344 aaKnown RBP13.14□□□□□ -0.31
H3F3B-213ENST00000593254 HLTFQ14527 1009 aaKnown RBP eCLIP13.14□□□□□ -0.31
H3F3B-213ENST00000593254 CERCAMQ5T4B2 595 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 ADAMTSL4Q6UY14 1074 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 NLRP8Q86W28 1048 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 NRROSQ86YC3 692 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 SFTPA2Q8IWL1 248 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 RAVER1Q8IY67 606 aaKnown RBP13.14□□□□□ -0.31
H3F3B-213ENST00000593254 CNTD1Q8N815 330 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.14□□□□□ -0.31
H3F3B-213ENST00000593254 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
H3F3B-213ENST00000593254 SCAMP4Q969E2 229 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 AP2M1Q96CW1 435 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 OLFM3Q96PB7 478 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 TRNAU1APQ9NX07 287 aaKnown RBP13.14□□□□□ -0.31
H3F3B-213ENST00000593254 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 CD84Q9UIB8 345 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 APPL1Q9UKG1 709 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 SUFUQ9UMX1 484 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
H3F3B-213ENST00000593254 CENPEQ02224 2701 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 B4DGG1 531 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 APOL1O14791 398 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 PLD2O14939 933 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 KRT1P04264 644 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 PYGLP06737 847 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 IVLP07476 585 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 GP1BBP13224 206 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 PNLIPP16233 465 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 ZFXP17010 805 aaPredicted RBP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 CD86P42081 329 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 GPR1P46091 355 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 HADHBP55084 474 aaKnown RBP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 CCL7P80098 99 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 ILF3Q12906 894 aaKnown RBP eCLIP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 UBAP2LQ14157 1087 aaKnown RBP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 PDK1Q15118 436 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 C14orf28Q4W4Y0 310 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 C17orf82Q86X59 251 aaPredicted RBP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 RHOT1Q8IXI2 618 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 NRSN1Q8IZ57 195 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 LPCAT1Q8NF37 534 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 KIAA1524Q8TCG1 905 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 SCARF2Q96GP6 870 aaPredicted RBP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 GFM1Q96RP9 751 aaKnown RBP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 ARHGAP9Q9BRR9 750 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 GSDMCQ9BYG8 508 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 TRIM5Q9C035 493 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 LRRN3Q9H3W5 708 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 DPEP2Q9H4A9 486 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 SYNDIG1Q9H7V2 258 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms