RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 OR6P1Q8NGX9 317 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 FATE1Q969F0 183 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 RTP3Q9BQQ7 232 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 ALG2Q9H553 416 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 RGS18Q9NS28 235 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 MARCH4Q9P2E8 410 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 POLG2Q9UHN1 485 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 INPP4BO15327 924 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 FOXD2O60548 495 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 SIX3O95343 332 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 ZNF12P17014 697 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 HOXB8P17481 243 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 SUOXP51687 545 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 NRG1Q02297 640 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 TNK2Q07912 1038 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 RPS6KA2Q15349 733 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 FAM117BQ6P1L5 589 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 TMEM26Q6ZUK4 368 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 TUBGCP3Q96CW5 907 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 COX4I2Q96KJ9 171 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 CPNE6O95741 557 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 BDNFP23560 247 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 RENBPP51606 427 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 MOGQ16653 247 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 FGD3Q5JSP0 725 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 CCNYL2Q5T2Q4 361 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 ZNF549Q6P9A3 640 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 CPNE9Q8IYJ1 553 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 OFCC1Q8IZS5 231 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 LEMD2Q8NC56 503 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 SMOC2Q9H3U7 446 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 NOL6Q9H6R4 1146 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 POPDC3Q9HBV1 291 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 ANAPC2Q9UJX6 822 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 ITM2BQ9Y287 266 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 TYW5A2RUC4 315 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 MEIS3P2A8K0S8 358 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 C9JVG2 144 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 H0YAE9 185 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 TREHO43280 583 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 MMP2P08253 660 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 PRR35P0CG20 571 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 MTHFD1P11586 935 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 FXNQ16595 210 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 ATOH8Q96SQ7 321 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 ADARB2Q9NS39 739 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 ABCC13Q9NSE7 274 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
SMARCA4-219ENST00000592604 LRRC14BA6NHZ5 514 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 E9PAM4 449 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 JUNBP17275 347 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CD247P20963 164 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CD86P42081 329 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 ZFP36L2P47974 494 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 EEFSECP57772 596 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 NAA20P61599 178 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 LIPEQ05469 1076 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 NFYCQ13952 458 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 IHHQ14623 411 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 MFSD10Q14728 455 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 OR4D1Q15615 310 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 GEN1Q17RS7 908 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 AASDHQ4L235 1098 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 SPATA19Q7Z5L4 167 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 C14orf80Q86SX3 495 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 ZBTB8BQ8NAP8 495 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 MAGEE2Q8TD90 523 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 TANKQ92844 425 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 PLEKHA8Q96JA3 519 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 NSUN5Q96P11 429 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 KCNA7Q96RP8 456 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 NAA50Q9GZZ1 169 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 TFB2MQ9H5Q4 396 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 MPP6Q9NZW5 540 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CRYL1Q9Y2S2 319 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 ASPDHA6ND91 283 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 UBXN8O00124 270 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 DYNC1LI2O43237 492 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 LDLRP01130 860 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 THP07101 528 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 LINC00032P0C843 101 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 APLP1P51693 650 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 C21orf59P57076 290 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 ACVR1Q04771 509 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 SPIDRQ14159 915 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 RCAN2Q14206 197 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 PFKFB4Q16877 469 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 ANKRD26P1Q6NSI1 321 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 DPP9Q86TI2 863 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 OR13F1Q8NGS4 319 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 SCAMP5Q8TAC9 235 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 DNAJB14Q8TBM8 379 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 EXT2Q93063 718 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 KCTD14Q9BQ13 255 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 ACBD6Q9BR61 282 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 PALMDQ9NP74 551 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 NT5MQ9NPB1 228 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 MIOSQ9NXC5 875 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms