RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 CALR3Q96L12 384 aaKnown RBP20.06■□□□□ 0.8
CIRBP-239ENST00000592467 QKIQ96PU8 341 aaKnown RBP eCLIP20.06■□□□□ 0.8
CIRBP-239ENST00000592467 ANP32EQ9BTT0 268 aa20.06■□□□□ 0.8
CIRBP-239ENST00000592467 MAGEE1Q9HCI5 957 aa20.06■□□□□ 0.8
CIRBP-239ENST00000592467 APPL1Q9UKG1 709 aa20.06■□□□□ 0.8
CIRBP-239ENST00000592467 OAS3Q9Y6K5 1087 aaKnown RBP20.06■□□□□ 0.8
CIRBP-239ENST00000592467 GRID2IPA4D2P6 1211 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 RGSL1A5PLK6 1076 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 DXOO77932 396 aaKnown RBP20.05■□□□□ 0.8
CIRBP-239ENST00000592467 MPOP05164 745 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 PYGLP06737 847 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 PIRTP0C851 137 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 GLB1P16278 677 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 CTNNA2P26232 953 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 CDC25BP30305 580 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 EIF2S3P41091 472 aaKnown RBP20.05■□□□□ 0.8
CIRBP-239ENST00000592467 CCL7P80098 99 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 CTBSQ01459 385 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 PCSK7Q16549 785 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 PYCR3Q53H96 274 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 DOK6Q6PKX4 331 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 C19orf48Q6RUI8 117 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 ZC3H18Q86VM9 953 aaKnown RBP20.05■□□□□ 0.8
CIRBP-239ENST00000592467 ZNF567Q8N184 647 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 OR6C4Q8NGE1 309 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 WDR48Q8TAF3 677 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 ALG3Q92685 438 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 ATXN7L3BQ96GX2 97 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 BAG1Q99933 345 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-239ENST00000592467 HEMGNQ9BXL5 484 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 SUDS3Q9H7L9 328 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-239ENST00000592467 TAAR2Q9P1P5 351 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 SPO11Q9Y5K1 396 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 RNF215Q9Y6U7 377 aa20.05■□□□□ 0.8
CIRBP-239ENST00000592467 FAM208BQ5VWN6 2430 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 LOC400499M0QZD8 3231 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 LOC285095A0A1B0GVY8 99 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 PMS2P1A4D2B8 440 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 B4DGG1 531 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 INPP4BO15327 924 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 DNAJC6O75061 913 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 NDST3O95803 873 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 PNLIPP16233 465 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 NFKB1P19838 968 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 PTPN7P35236 360 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 LSSP48449 732 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 COPS2P61201 443 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 NOMO1Q15155 1222 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 TBC1D25Q3MII6 688 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 CCDC50Q8IVM0 306 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 GPR26Q8NDV2 337 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 GRAMD1AQ96CP6 724 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 OXNAD1Q96HP4 312 aaPredicted RBP20.04■□□□□ 0.8
CIRBP-239ENST00000592467 GORASP1Q9BQQ3 440 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 GSDMCQ9BYG8 508 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 DPEP2Q9H4A9 486 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 FAM83DQ9H4H8 585 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 C10orf88Q9H8K7 445 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 POLR1BQ9H9Y6 1135 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 ZFYVE1Q9HBF4 777 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 ASCL3Q9NQ33 180 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 UBP1Q9NZI7 540 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 PKD2L2Q9NZM6 624 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 NFKBIL1Q9UBC1 381 aaPredicted RBP20.04■□□□□ 0.8
CIRBP-239ENST00000592467 EFR3BQ9Y2G0 817 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.04■□□□□ 0.8
CIRBP-239ENST00000592467 ZNF711Q9Y462 761 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 UNC13CQ8NB66 2214 aa20.04■□□□□ 0.8
CIRBP-239ENST00000592467 HACD1B0YJ81 288 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 APOC4-APOC2K7ER74 178 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 AURKAO14965 403 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 PMPCBO75439 489 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 APOC2P02655 101 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 MAZP56270 477 aaKnown RBP20.03■□□□□ 0.8
CIRBP-239ENST00000592467 GABREP78334 506 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 ILF3Q12906 894 aaKnown RBP eCLIP20.03■□□□□ 0.8
CIRBP-239ENST00000592467 XRCC4Q13426 336 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 COL28A1Q2UY09 1125 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 AADACL2Q6P093 401 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 IGF2-ASQ6U949 168 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 ZNF438Q7Z4V0 828 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 B3GNT8Q7Z7M8 397 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 NAGSQ8N159 534 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 ZDHHC1Q8WTX9 485 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 HNRNPLLQ8WVV9 542 aaKnown RBP20.03■□□□□ 0.8
CIRBP-239ENST00000592467 PATE1Q8WXA2 126 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 HTR3CQ8WXA8 447 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 OR2M4Q96R27 311 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 FCRL5Q96RD9 977 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 LRRN3Q9H3W5 708 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 VPS18Q9P253 973 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 IMPACTQ9P2X3 320 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 TRIM10Q9UDY6 481 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 SATB2Q9UPW6 733 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 SHOC2Q9UQ13 582 aa20.03■□□□□ 0.8
CIRBP-239ENST00000592467 MTSS1O43312 755 aa20.02■□□□□ 0.8
CIRBP-239ENST00000592467 NUDT21O43809 227 aaKnown RBP20.02■□□□□ 0.8
CIRBP-239ENST00000592467 ATP1A1P05023 1023 aaKnown RBP20.02■□□□□ 0.8
CIRBP-239ENST00000592467 RPLP0P05388 317 aaKnown RBP20.02■□□□□ 0.8
CIRBP-239ENST00000592467 WNT3AP56704 352 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms