RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PCDHB16Q9NRJ7 776 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ARGLU1Q9NWB6 273 aaPredicted RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 TBK1Q9UHD2 729 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 SLC45A1Q9Y2W3 748 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 NOSIPQ9Y314 301 aaKnown RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 NACADO15069 1562 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 SCAPERQ9BY12 1400 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 RNF123Q5XPI4 1314 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 KDM3AQ9Y4C1 1321 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 A0A1B0GVM2 712 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 LINC00854A0A1B0GVQ3 168 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 TRIM64A6NGJ6 449 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 TRIM64BA6NI03 449 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 LACTBL1A8MY62 500 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 NPIPB11E5RHQ5 1161 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 J3KRW8 73 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 SNAP23O00161 211 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 CYTH3O43739 400 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 DDHD2O94830 711 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 ETFAP13804 333 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 GCFC2P16383 781 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 CYP11B2P19099 503 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 MCM3P25205 808 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 ITGB8P26012 769 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 C21orf33P30042 268 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 ELF1P32519 619 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 HPDP32754 393 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 PIGAP37287 484 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 RPL3P39023 403 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 MXI1P50539 228 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 UBASH3AP57075 661 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 DSC1Q08554 894 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 TBX2Q13207 712 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 ITGADQ13349 1161 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 RASA2Q15283 850 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 HIST2H2ACQ16777 129 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 LRRC23Q53EV4 343 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 TDRD12Q587J7 1177 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 TYW3Q6IPR3 259 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 C8orf82Q6P1X6 216 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 INO80CQ6PI98 192 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 DSTYKQ6XUX3 929 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 ZNF517Q6ZMY9 492 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 CCDC129Q6ZRS4 1044 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 SLC46A3Q7Z3Q1 461 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 MAATS1Q7Z4T9 603 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 SPATA21Q7Z572 469 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 R3HCC1LQ7Z5L2 792 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 FJX1Q86VR8 437 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 IQCA1Q86XH1 822 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 CNTROBQ8N137 903 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 ZCCHC9Q8N567 271 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 AADATQ8N5Z0 425 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 IQCF1Q8N6M8 205 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 APPL2Q8NEU8 664 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 CADM4Q8NFZ8 388 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 PIBF1Q8WXW3 757 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 CDKL2Q92772 493 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 OTULINQ96BN8 352 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 PABPC5Q96DU9 382 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 MARK4Q96L34 752 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 NR1H4Q96RI1 486 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 ZPBPQ9BS86 351 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 TMEM204Q9BSN7 226 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 THUMPD2Q9BTF0 503 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 SPZ1Q9BXG8 430 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 HIPK2Q9H2X6 1198 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 PLEKHA4Q9H4M7 779 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 DBNDD1Q9H9R9 158 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 DDX4Q9NQI0 724 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 SH3GLB2Q9NR46 395 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 TAS2R10Q9NYW0 307 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 CISD1Q9NZ45 108 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 OR6C3Q9NZP0 311 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 FBXL5Q9UKA1 691 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 A4GNTQ9UNA3 340 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 PRELID1Q9Y255 219 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 FAM96BQ9Y3D0 163 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 ZNF711Q9Y462 761 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 TTLL3Q9Y4R7 772 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 ANGPTL3Q9Y5C1 460 aa3.54□□□□□ -1.84
VMP1-212ENST00000591782 V9GYY5 206 aaPredicted RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 VIRMAQ69YN4 1812 aaKnown RBP3.54□□□□□ -1.84
VMP1-212ENST00000591782 IQANK1A0A1B0GTG1 560 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 A0A1W2PPH5 198 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CLEC18AA5D8T8 446 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 C19orf81C9J6K1 198 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 M0QX08 132 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 PDLIM1O00151 329 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TTI1O43156 1089 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TSC22D2O75157 780 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 B3GALNT1O75752 331 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 SEC31AO94979 1220 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 VNN2O95498 520 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 MT-CYBP00156 380 aaPredicted RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 GLUD1P00367 558 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TFP02787 698 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 S100A6P06703 90 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TROVE2P10155 538 aaKnown RBP eCLIP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms