RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 C2orf54Q08AI8 447 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 NIPAL4Q0D2K0 466 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 TCF15Q12870 199 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SIM2Q14190 667 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PRPSAP1Q14558 356 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SIX1Q15475 284 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 OASLQ15646 514 aaKnown RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 KCTD19Q17RG1 926 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ANKRD20A2Q5SQ80 823 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SYCP2LQ5T4T6 812 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PIP5KL1Q5T9C9 394 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ARMC12Q5T9G4 340 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ANKRD20A1Q5TYW2 823 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ANKRD20A3Q5VUR7 823 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PRAMEF13Q5VWM6 474 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PAPD7Q5XG87 772 aaKnown RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ERAP2Q6P179 960 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 NCEH1Q6PIU2 408 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 USP30Q70CQ3 517 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 LPCAT2Q7L5N7 544 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PID1Q7Z2X4 250 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 KDELC2Q7Z4H8 507 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PRUNE1Q86TP1 453 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF227Q86WZ6 799 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ZSWIM9Q86XI8 627 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 KLHL7Q8IXQ5 586 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 TMEFF1Q8IYR6 380 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 RASGEF1CQ8N431 466 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 DTWD1Q8N5C7 304 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 CNTD1Q8N815 330 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PRELID2Q8N945 189 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 KCT2Q8NC54 265 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 TMIEQ8NEW7 156 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SPATA22Q8NHS9 363 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SLC35B2Q8TB61 432 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ACTRT1Q8TDG2 376 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 NKD2Q969F2 451 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 LRIG1Q96JA1 1093 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 TEKT5Q96M29 485 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 VAT1Q99536 393 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 MYOCQ99972 504 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 FICDQ9BVA6 458 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 TDRD1Q9BXT4 1180 aaKnown RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 BTBD1Q9H0C5 482 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SLC25A51Q9H1U9 297 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 AMACRQ9UHK6 382 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 MBD1Q9UIS9 605 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 TRHDEQ9UKU6 1024 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 FZD4Q9ULV1 537 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SCN8AQ9UQD0 1980 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 LRRK1Q38SD2 2015 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SDK1Q7Z5N4 2213 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3DA0A087WVF3 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3IA0A087WXS9 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3EA0A087X179 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3KA0A087X1G2 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TSPAN11A1L157 253 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 GOLGA6CA6NDK9 693 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 GOLGA6BA6NDN3 693 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3FA6NER0 549 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 A8MX80 341 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 SHISA8B8ZZ34 492 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3LB9A6J9 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 E7EVH7 732 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 LCE2BO14633 110 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 SLC7A4O43246 635 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PRODHO43272 600 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 OIP5O43482 229 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PLRG1O43660 514 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ANXA9O76027 345 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PGLSO95336 258 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 WISP1O95388 367 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 GAS8O95995 478 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 MMP2P08253 660 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ALPIP09923 528 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ELFN1P0C7U0 828 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3HP0C7X1 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PIRTP0C851 137 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ZSCAN5DPP0CG00 497 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 GOLGA6DP0CG33 693 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ETS1P14921 441 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PRLRP16471 622 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 NFKBIAP25963 317 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 OXTRP30559 389 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 MMP12P39900 470 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CSNK1DP48730 415 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 FNTAP49354 379 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 GEMP55040 296 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 WNT3AP56704 352 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 SUMO1P63165 101 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 FAM193AP78312 1265 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 BASP1P80723 227 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CKAP4Q07065 602 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 NSUN2Q08J23 767 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CCDC15Q0P6D6 951 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ELP6Q0PNE2 266 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 OLIG2Q13516 323 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PPP1R7Q15435 360 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TRIP13Q15645 432 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CCNG2Q16589 344 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms