RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 EVA1BQ9NVM1 165 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 SLC17A4Q9Y2C5 497 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 R3HDM2Q9Y2K5 976 aaKnown RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF711Q9Y462 761 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 LAMA5O15230 3695 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 LRP4O75096 1905 aa9.15□□□□□ -0.95
DNMT1-223ENST00000591239 PTPRBP23467 1997 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 C5orf60A6NFR6 353 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 AURKAO14965 403 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 INPP4BO15327 924 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 ANXA9O76027 345 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 AGTP01019 485 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SLC4A1P02730 911 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 HLA-DPA1P20036 260 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 PSMB4P28070 264 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 CHRNA4P43681 627 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 POLD2P49005 469 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 RPIAP49247 311 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 GEMP55040 296 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 E2F1Q01094 437 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 NR0B2Q15466 257 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 GUSBP11Q6P575 273 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 DOK6Q6PKX4 331 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 TAF8Q7Z7C8 310 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 TRIM74Q86UV6 250 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 TMPRSS12Q86WS5 348 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 MARCH9Q86YJ5 346 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SLC35F3Q8IY50 421 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 FAM71DQ8N9W8 422 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 GPR26Q8NDV2 337 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 TRIM58Q8NG06 486 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 GATA6Q92908 595 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-223ENST00000591239 COX14Q96I36 57 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SPATA13Q96N96 652 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SPATA16Q9BXB7 569 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 CDH19Q9H159 772 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 TRABDQ9H4I3 376 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SUDS3Q9H7L9 328 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-223ENST00000591239 CARS2Q9HA77 564 aaKnown RBP9.14□□□□□ -0.95
DNMT1-223ENST00000591239 RAD18Q9NS91 495 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 CNOT6Q9ULM6 557 aaKnown RBP9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SUFUQ9UMX1 484 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 GPR34Q9UPC5 381 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 TMEM98Q9Y2Y6 226 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 AAR2Q9Y312 384 aaKnown RBP9.14□□□□□ -0.95
DNMT1-223ENST00000591239 SPO11Q9Y5K1 396 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 CFAP47Q6ZTR5 3102 aa9.14□□□□□ -0.95
DNMT1-223ENST00000591239 CELSR3Q9NYQ7 3312 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 CPED1A4D0V7 1026 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 EME2A4GXA9 379 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 FAM149AA5PLN7 773 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 FADS2P1A8MWK0 482 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 C1QTNF9BB2RNN3 333 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 FGF1P05230 155 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 GP1BAP07359 652 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 IVLP07476 585 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 C1QTNF9P0C862 333 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 JUPP14923 745 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 BPIP17213 487 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 ADRA1AP35348 466 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 HMGCLP35914 325 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 GNPDA1P46926 289 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 CLDN6P56747 220 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 DCDC1P59894 354 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 PRPSAP1Q14558 356 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 HES3Q5TGS1 186 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 UNQ6494/PRO21346Q6UXR6 183 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 RANBP10Q6VN20 620 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 SLC13A5Q86YT5 568 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 TTC30BQ8N4P2 665 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 ARL10Q8N8L6 244 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 FAM46DQ8NEK8 389 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 CCL4L1Q8NHW4 92 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 SLC35B2Q8TB61 432 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 IFI44Q8TCB0 444 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 BLOC1S5Q8TDH9 187 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 GPBAR1Q8TDU6 330 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 PTCD2Q8WV60 388 aaKnown RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 ATG4AQ8WYN0 398 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 PPP1R2P1Q96PQ5 205 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 TMEM121Q9BTD3 319 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 ZSCAN5AQ9BUG6 496 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 FICDQ9BVA6 458 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 TMEM121BQ9BXQ6 578 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 TLR10Q9BXR5 811 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 CARD9Q9H257 536 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 BPIFA1Q9NP55 256 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 TRNAU1APQ9NX07 287 aaKnown RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 HACD3Q9P035 362 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 SIRPGQ9P1W8 387 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 NFKBIL1Q9UBC1 381 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 GULP1Q9UBP9 304 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 PADI4Q9UM07 663 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 OAS3Q9Y6K5 1087 aaKnown RBP9.13□□□□□ -0.95
DNMT1-223ENST00000591239 KNTC1P50748 2209 aa9.13□□□□□ -0.95
DNMT1-223ENST00000591239 PLXNB3Q9ULL4 1909 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms