RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZMYND15Q9H091 742 aa17.25■□□□□ 0.35
RETREG3-210ENST00000590541 TRIT1Q9H3H1 467 aaKnown RBP17.25■□□□□ 0.35
RETREG3-210ENST00000590541 MRPL47Q9HD33 250 aaKnown RBP17.25■□□□□ 0.35
RETREG3-210ENST00000590541 TAS2R14Q9NYV8 317 aa17.25■□□□□ 0.35
RETREG3-210ENST00000590541 FTLP02792 175 aaPredicted RBP17.24■□□□□ 0.35
RETREG3-210ENST00000590541 RNF224P0DH78 156 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 GNLYP22749 145 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 MAN1A1P33908 653 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 ZNF135P52742 658 aaPredicted RBP17.24■□□□□ 0.35
RETREG3-210ENST00000590541 NDST2P52849 883 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 UBASH3AP57075 661 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 FANCCQ00597 558 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 ASB18Q6ZVZ8 466 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 ZNF571Q7Z3V5 609 aaPredicted RBP17.24■□□□□ 0.35
RETREG3-210ENST00000590541 PSTKQ8IV42 348 aaKnown RBP17.24■□□□□ 0.35
RETREG3-210ENST00000590541 CCDC13Q8IYE1 715 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 PAF1Q8N7H5 531 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 OR10G6Q8NH81 332 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 SLC37A2Q8TED4 501 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 DTD2Q96FN9 168 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 SCARF2Q96GP6 870 aaPredicted RBP17.24■□□□□ 0.35
RETREG3-210ENST00000590541 SLC38A3Q99624 504 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 PRDM8Q9NQV8 689 aa17.24■□□□□ 0.35
RETREG3-210ENST00000590541 TRBV23OR9-2A0A075B6M9 112 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 TMEM191CA6NGB0 347 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 TMCO5BA8MYB1 307 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 MKRN2OSH3BPM6 223 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 VPS4BO75351 444 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 HEXIM1O94992 359 aaKnown RBP17.23■□□□□ 0.35
RETREG3-210ENST00000590541 FURINP09958 794 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 PSMA2P25787 234 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 ETV3P41162 512 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 NSUN2Q08J23 767 aaKnown RBP eCLIP17.23■□□□□ 0.35
RETREG3-210ENST00000590541 MAP7Q14244 749 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-210ENST00000590541 DENND2CQ68D51 928 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 WDR74Q6RFH5 385 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-210ENST00000590541 HSD11B1LQ7Z5J1 315 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 LUZP1Q86V48 1076 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 SFRP1Q8N474 314 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 SSC4DQ8WTU2 575 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 SPOCK2Q92563 424 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 CINPQ9BW66 212 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-210ENST00000590541 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 KCTD5Q9NXV2 234 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 VPS4AQ9UN37 437 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 RPS6KL1Q9Y6S9 549 aa17.23■□□□□ 0.35
RETREG3-210ENST00000590541 ARHGAP42A6NI28 874 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 DDX3XO00571 662 aaKnown RBP eCLIP17.22■□□□□ 0.353e-16■■■■□ 25.4
RETREG3-210ENST00000590541 EML2O95834 649 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 PDGFAP04085 211 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 TPM3P06753 285 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 LHCGRP22888 699 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 TEAD1P28347 426 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 PBX1P40424 430 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 PPM1FP49593 454 aaPredicted RBP17.22■□□□□ 0.35
RETREG3-210ENST00000590541 SCNN1BP51168 640 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 OGDHQ02218 1023 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 ERMARDQ5T6L9 678 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 RAET1GQ6H3X3 334 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 DOK6Q6PKX4 331 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 ESX1Q8N693 406 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 GALNT11Q8NCW6 608 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 OR2M4Q96R27 311 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 CNOT8Q9UFF9 292 aaKnown RBP17.22■□□□□ 0.35
RETREG3-210ENST00000590541 AP4E1Q9UPM8 1137 aa17.22■□□□□ 0.35
RETREG3-210ENST00000590541 TTC24A2A3L6 582 aaPredicted RBP17.21■□□□□ 0.35
RETREG3-210ENST00000590541 GOLGA6CA6NDK9 693 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 GOLGA6BA6NDN3 693 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 POLR1CO15160 346 aaPredicted RBP17.21■□□□□ 0.35
RETREG3-210ENST00000590541 HTRA2O43464 458 aaPredicted RBP17.21■□□□□ 0.35
RETREG3-210ENST00000590541 PRPSAP2O60256 369 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 SEMA7AO75326 666 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 MAP3K6O95382 1288 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 SOD1P00441 154 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 GOLGA6DP0CG33 693 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 VIPR1P32241 457 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 TPI1P60174 286 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 AP1S1P61966 158 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 ZBED6P86452 979 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 PYCR3Q53H96 274 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 E4F1Q66K89 784 aaPredicted RBP17.21■□□□□ 0.35
RETREG3-210ENST00000590541 ARHGAP36Q6ZRI8 547 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 Q6ZVL8 140 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 ARHGAP12Q8IWW6 846 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 NCSTNQ92542 709 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 ZNF653Q96CK0 615 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 GOLGA6AQ9NYA3 693 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 TLK1Q9UKI8 766 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 CAPN11Q9UMQ6 739 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 TMEM98Q9Y2Y6 226 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 PCDHB3Q9Y5E6 796 aa17.21■□□□□ 0.35
RETREG3-210ENST00000590541 SERPING1P05155 500 aa17.2■□□□□ 0.34
RETREG3-210ENST00000590541 ZNF28P17035 718 aa17.2■□□□□ 0.34
RETREG3-210ENST00000590541 DLSTP36957 453 aa17.2■□□□□ 0.34
RETREG3-210ENST00000590541 HCAR3P49019 387 aa17.2■□□□□ 0.34
RETREG3-210ENST00000590541 ERV3-1Q14264 604 aa17.2■□□□□ 0.34
RETREG3-210ENST00000590541 PTPRRQ15256 657 aa17.2■□□□□ 0.34
RETREG3-210ENST00000590541 TDRD12Q587J7 1177 aaKnown RBP17.2■□□□□ 0.34
RETREG3-210ENST00000590541 TMEM135Q86UB9 458 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms