RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 HOXC4P09017 264 aaPredicted RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 ANKRD34CP0C6C1 535 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SLC2A3P11169 496 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 KRT5P13647 590 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 UCHL3P15374 230 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 LPOP22079 712 aaPredicted RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 PTPN4P29074 926 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 MMP12P39900 470 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 GPD2P43304 727 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 LIG3P49916 1009 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 GFERP55789 205 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 POLR2FP61218 127 aaKnown RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 YWHAZP63104 245 aaKnown RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 CTBSQ01459 385 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SLC20A2Q08357 652 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 ILF3Q12906 894 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS25-204ENST00000589577 NR1I3Q14994 352 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 CNGA2Q16280 664 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 MYLK3Q32MK0 819 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 CBWD6Q4V339 395 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 TDRD12Q587J7 1177 aaKnown RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 FIGNQ5HY92 759 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 CBWD3Q5JTY5 395 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 DCAF10Q5QP82 559 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 CBWD5Q5RIA9 395 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 FAM69BQ5VUD6 431 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 FAM199XQ6PEV8 388 aaPredicted RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 SYVN1Q86TM6 617 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 ZSWIM9Q86XI8 627 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 VSTM4Q8IW00 320 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 RYBPQ8N488 228 aaPredicted RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 OR10G6Q8NH81 332 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SPATA3Q8NHX4 192 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SLC37A2Q8TED4 501 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 ARHGEF2Q92974 986 aaKnown RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 RELTQ969Z4 430 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 C14orf79Q96F83 325 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 ELMO2Q96JJ3 720 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SLC2A13Q96QE2 648 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 OR6C1Q96RD1 312 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SPON2Q9BUD6 331 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 OSBPL1AQ9BXW6 950 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 GSDMCQ9BYG8 508 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 ZMYND15Q9H091 742 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SIK2Q9H0K1 926 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 DEF6Q9H4E7 631 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 ATP13A1Q9HD20 1204 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 UBE2TQ9NPD8 197 aaPredicted RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 CHST11Q9NPF2 352 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 PCDH12Q9NPG4 1184 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 LUC7LQ9NQ29 371 aaKnown RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 TRNAU1APQ9NX07 287 aaKnown RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 GPR83Q9NYM4 423 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 IMPACTQ9P2X3 320 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SLC12A6Q9UHW9 1150 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 LNPEPQ9UIQ6 1025 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 MOSPD1Q9UJG1 213 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 PADI1Q9ULC6 663 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 MYO6Q9UM54 1294 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 NEU2Q9Y3R4 380 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 CSAG2Q9Y5P2 127 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 ABCA4P78363 2273 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 CCDC88CQ9P219 2028 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 A0A1B0GUH1 482 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 ILVBLA1L0T0 632 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 TSPAN11A1L157 253 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 AKR1B15C9JRZ8 316 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 E5RJQ4 531 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 INSIG1O15503 277 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 TEX33O43247 280 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 SART1O43290 800 aaKnown RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 GRID2O43424 1007 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 MED7O43513 233 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 BUB1BO60566 1050 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 SPAG6O75602 509 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 RECQL5O94762 991 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 TMEM63AO94886 807 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 POP4O95707 220 aaKnown RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 PAEPP09466 180 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 FGF5P12034 268 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 FERP16591 822 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 TFE3P19532 575 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 KLK2P20151 261 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 KELP23276 732 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 PON1P27169 355 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 OR1E1P30953 314 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 ACVRL1P37023 503 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 ADCY8P40145 1251 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 KIR3DL1P43629 444 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 NOP2P46087 812 aaKnown RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 GNPDA1P46926 289 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 ZBED6P86452 979 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 GNA12Q03113 381 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 RALGDSQ12967 914 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 BIRC2Q13490 618 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 ZNF235Q14590 738 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 STILQ15468 1287 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 CDSNQ15517 529 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 KLHDC7AQ5VTJ3 777 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms