RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CADM1Q9BY67 442 aaKnown RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 MAN1C1Q9NR34 630 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 SPHK2Q9NRA0 654 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 RAD18Q9NS91 495 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 NDE1Q9NXR1 346 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 KLHL42Q9P2K6 505 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 BAIAP2L1Q9UHR4 511 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 ZDHHC2Q9UIJ5 367 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 TRMT6Q9UJA5 497 aaKnown RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 ANAPC1Q9H1A4 1944 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 RGSL1A5PLK6 1076 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 CAPN8A6NHC0 703 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 PRR5-ARHGAP8B1AHC4 643 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 WASH3PC4AMC7 463 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 GRID2O43424 1007 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 BUD23O43709 281 aaKnown RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 MOSPD3O75425 235 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 MT-CO1P00395 513 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 SLC4A1P02730 911 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ASLP04424 464 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ENO1P06733 434 aaKnown RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 PABPC1P11940 636 aaKnown RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 SRCP12931 536 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 NCF2P19878 526 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 CD70P32970 193 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 SPAM1P38567 509 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 RECQLP46063 649 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 COPAP53621 1224 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 INHBCP55103 352 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 IL2P60568 153 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 HERVK_113P63132 956 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ARHGAP8P85298 464 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 XIAPP98170 497 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ECT2LQ008S8 904 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 TIAL1Q01085 375 aaKnown RBP eCLIP10.34□□□□□ -0.752e-11■■■■■ 40
VPS25-203ENST00000589520 USP4Q13107 963 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 SEMA3AQ14563 771 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 PTPRCAPQ14761 206 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 NAA25Q14CX7 972 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ZNF77Q15935 545 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 PRSS36Q5K4E3 855 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ZNF678Q5SXM1 525 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 TMEM207Q6UWW9 146 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 TPRG1Q6ZUI0 275 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 USP45Q70EL2 814 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 TAS2R42Q7RTR8 314 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 EFL1Q7Z2Z2 1120 aaKnown RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 MAVSQ7Z434 540 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 KIAA0907Q7Z7F0 614 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 TTC7BQ86TV6 843 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 TREML1Q86YW5 311 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 CAMK1DQ8IU85 385 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 RAVER1Q8IY67 606 aaKnown RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 RBFAQ8N0V3 343 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 CLYBLQ8N0X4 340 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 AHI1Q8N157 1196 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 RYBPQ8N488 228 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 CELF5Q8N6W0 485 aaKnown RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 PAF1Q8N7H5 531 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 RP9Q8TA86 221 aaKnown RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 GRIN3AQ8TCU5 1115 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 WFIKKN2Q8TEU8 576 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ANKRD49Q8WVL7 239 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ULK4Q96C45 1275 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ECHDC3Q96DC8 303 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 SCRN2Q96FV2 425 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ANKRD27Q96NW4 1050 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 BIRC8Q96P09 236 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 LBHD1Q9BQE6 289 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 C1QTNF3Q9BXJ4 246 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ERVK-6Q9BXR3 956 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 LMAN2LQ9H0V9 348 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 SUV39H2Q9H5I1 410 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 ALG9Q9H6U8 611 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 ARMCX1Q9P291 453 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 HECAQ9UBI9 543 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 EVLQ9UI08 416 aaPredicted RBP10.34□□□□□ -0.75
VPS25-203ENST00000589520 NUMBLQ9Y6R0 609 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 MIA3Q5JRA6 1907 aa10.34□□□□□ -0.75
VPS25-203ENST00000589520 CACNA1AO00555 2505 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 TRBV5-4A0A0C4DH59 114 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 E5RI56 91 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 EIF3FO00303 357 aaPredicted RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 CCL22O00626 93 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 SMAD6O43541 496 aaKnown RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 KLK8O60259 260 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 VPS4BO75351 444 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 ZNF821O75541 412 aaPredicted RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 CIB2O75838 187 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 TM7SF2O76062 418 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CHRNGP07510 517 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CYP2A6P11509 494 aaPredicted RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 ZNF30P17039 623 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CHRM3P20309 590 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 SP100P23497 879 aaPredicted RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 MPSTP25325 297 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 HLA-FP30511 346 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 PGM1P36871 562 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms