RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 ENO1P06733 434 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 CD48P09326 243 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 FBXO45P0C2W1 286 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 UNGP13051 313 aaPredicted RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 CCDC130P13994 396 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CD1EP15812 388 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PEX2P28328 305 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 EPHA8P29322 1005 aaPredicted RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 NTSR1P30989 418 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SLC5A2P31639 672 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 L1CAMP32004 1257 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CSTF2P33240 577 aaKnown RBP eCLIP4.18□□□□□ -1.74
LIG3-211ENST00000588713 CPOXP36551 454 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 FDFT1P37268 417 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PIK3CAP42336 1068 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 NSFP46459 744 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 VPS41P49754 854 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SCNN1BP51168 640 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 TPMTP51580 245 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ARSEP51690 589 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 COPAP53621 1224 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 NR1H2P55055 460 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 AQP4P55087 323 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 LTBQ06643 244 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PPP3CAQ08209 521 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 KCNA1Q09470 495 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 TBL3Q12788 808 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 BNIP3Q12983 259 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PDIA2Q13087 525 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 GPS1Q13098 491 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CBX3Q13185 183 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 FASTKD3Q14CZ7 662 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 VEPH1Q14D04 833 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 TRIP13Q15645 432 aaPredicted RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 OASLQ15646 514 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 KCTD19Q17RG1 926 aaPredicted RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 GAB4Q2WGN9 574 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 KBTBD12Q3ZCT8 623 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CEP55Q53EZ4 464 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SFT2D3Q587I9 215 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 EGFLAMQ63HQ2 1017 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SDE2Q6IQ49 451 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ZFP1Q6P2D0 407 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 KLHDC10Q6PID8 442 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 IGF2-ASQ6U949 168 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CD300LGQ6UXG3 332 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 RBM44Q6ZP01 1051 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 GSTA5Q7RTV2 222 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 TAS1R3Q7RTX0 852 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CLEC14AQ86T13 490 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PATL1Q86TB9 770 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 TTC7BQ86TV6 843 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SATL1Q86VE3 508 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CPNE8Q86YQ8 564 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 MIB1Q86YT6 1006 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 MAP7D3Q8IWC1 876 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 MCOLN2Q8IZK6 566 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 NAGSQ8N159 534 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PPM1KQ8N3J5 372 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 MYCT1Q8N699 235 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 XXYLT1Q8NBI6 393 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ATAD1Q8NBU5 361 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 RNF149Q8NC42 400 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PLEKHO2Q8TD55 490 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ACTRT2Q8TDY3 377 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 GIPC2Q8TF65 315 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SLC44A1Q8WWI5 657 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 STON2Q8WXE9 905 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 JPH3Q8WXH2 748 aaPredicted RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 NDRG1Q92597 394 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 DLG3Q92796 817 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SLC5A5Q92911 643 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 TMEM143Q96AN5 459 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ARRDC3Q96B67 414 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 DCUN1D1Q96GG9 259 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ABHD17AQ96GS6 310 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 VPS50Q96JG6 964 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 BTBD6Q96KE9 485 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 LRGUKQ96M69 825 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 KREMEN1Q96MU8 473 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SLITRK1Q96PX8 696 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ACCSQ96QU6 501 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 CYTH2Q99418 400 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SLX1AQ9BQ83 275 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 HAUS8Q9BT25 410 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 OXCT2Q9BYC2 517 aaPredicted RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 GRIP2Q9C0E4 1043 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 ZCWPW1Q9H0M4 648 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 C6orf106Q9H6K1 298 aaPredicted RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 DHX33Q9H6R0 707 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 PCDH18Q9HCL0 1135 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 TMEM8AQ9HCN3 771 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PNPLA8Q9NP80 782 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 PRDM8Q9NQV8 689 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 FAIMQ9NVQ4 179 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 RHBDL2Q9NX52 303 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 RAB20Q9NX57 234 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 DDX56Q9NY93 547 aaKnown RBP4.18□□□□□ -1.74
LIG3-211ENST00000588713 SEPT10Q9P0V9 454 aa4.18□□□□□ -1.74
LIG3-211ENST00000588713 SIRPGQ9P1W8 387 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms