RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 C7orf26Q96N11 449 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 KLF6Q99612 283 aaPredicted RBP9.64□□□□□ -0.87
LINC01539-201ENST00000587904 CIB1Q99828 191 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 FICDQ9BVA6 458 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 MROQ9BYG7 248 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 MAGEH1Q9H213 219 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 ARNT2Q9HBZ2 717 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 MRPL17Q9NRX2 175 aaKnown RBP9.64□□□□□ -0.87
LINC01539-201ENST00000587904 PIH1D1Q9NWS0 290 aaKnown RBP9.64□□□□□ -0.87
LINC01539-201ENST00000587904 GRID1Q9ULK0 1009 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 PLA2G4CQ9UP65 541 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 PLLPQ9Y342 182 aa9.64□□□□□ -0.87
LINC01539-201ENST00000587904 HMX2A2RU54 273 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 FAM172BPA6NC97 362 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PRRG1O14668 218 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 COCHO43405 550 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 UGT1A9O60656 530 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PRAMEF11O60813 436 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 GLRA3O75311 464 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 CLDN11O75508 207 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 STAMBPO95630 424 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 GLULP15104 373 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 ATP6V1B1P15313 513 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 ETFBP38117 255 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 CDH4P55283 916 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 P2RX3P56373 397 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 DSTNP60981 165 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PPP2R2BQ00005 443 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 MYBPC1Q00872 1141 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 OLIG2Q13516 323 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 BMPR2Q13873 1038 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 OXA1LQ15070 435 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 SLC14A2Q15849 920 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 CCDC58Q4VC31 144 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 CERCAMQ5T4B2 595 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 MROH9Q5TGP6 573 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 C1orf146Q5VVC0 180 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 FAM117BQ6P1L5 589 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PKN3Q6P5Z2 889 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 KCNMB4Q86W47 210 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 ULK2Q8IYT8 1036 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 LGI2Q8N0V4 545 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 SPATA22Q8NHS9 363 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 ZNF75CPQ92670 426 aaPredicted RBP9.63□□□□□ -0.87
LINC01539-201ENST00000587904 FAR2Q96K12 515 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 FCRL3Q96P31 734 aaPredicted RBP9.63□□□□□ -0.87
LINC01539-201ENST00000587904 FAM111AQ96PZ2 611 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 YME1L1Q96TA2 773 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 RBBP8Q99708 897 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 KLHL25Q9H0H3 589 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 CDH19Q9H159 772 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 RUBCNLQ9H714 662 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 UGT1A7Q9HAW7 530 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 UGT1A10Q9HAW8 530 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 UGT1A8Q9HAW9 530 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 C12orf4Q9NQ89 552 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 UBP1Q9NZI7 540 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 SLC17A7Q9P2U7 560 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 VPS51Q9UID3 782 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 DTNAQ9Y4J8 743 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PCDHB12Q9Y5F1 795 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PCDHGA3Q9Y5H0 932 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 KIAA1671Q9BY89 1806 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 ILVBLA1L0T0 632 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 ZSCAN5BA6NJL1 495 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 DNAJA2O60884 412 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PAMP19021 973 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 KCNQ1P51787 676 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 LIMK2P53671 638 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 COX10Q12887 443 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 UGP2Q16851 508 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 LSM12Q3MHD2 195 aaKnown RBP9.63□□□□□ -0.87
LINC01539-201ENST00000587904 DENND5AQ6IQ26 1287 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 KDELC1Q6UW63 502 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 RANBP10Q6VN20 620 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 OTOAQ7RTW8 1153 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 CNTN4Q8IWV2 1026 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PLPP6Q8IY26 295 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 UNC5BQ8IZJ1 945 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 NDUFAF2Q8N183 169 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 TBC1D15Q8TC07 691 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 HPS1Q92902 700 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PSMG2Q969U7 264 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 TADA1Q96BN2 335 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 TRIM43Q96BQ3 446 aaPredicted RBP9.63□□□□□ -0.87
LINC01539-201ENST00000587904 PABPC5Q96DU9 382 aaKnown RBP9.63□□□□□ -0.87
LINC01539-201ENST00000587904 MRGPRX2Q96LB1 330 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 LBHD1Q9BQE6 289 aaPredicted RBP9.63□□□□□ -0.87
LINC01539-201ENST00000587904 POLR1EQ9GZS1 481 aaKnown RBP9.63□□□□□ -0.87
LINC01539-201ENST00000587904 RNF38Q9H0F5 515 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 C1orf21Q9H246 121 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 MANSC1Q9H8J5 431 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 FANCEQ9HB96 536 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 ATP13A1Q9HD20 1204 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 IL23AQ9NPF7 189 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 SEPT3Q9UH03 358 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 TCAF1Q9Y4C2 921 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 INSL5Q9Y5Q6 135 aa9.63□□□□□ -0.87
LINC01539-201ENST00000587904 HEATR9A2RTY3 570 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms