RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 TERF1P54274 439 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 SESN2P58004 480 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-204ENST00000586558 SKIDA1Q1XH10 827 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 ZNF423Q2M1K9 1284 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 AASDHQ4L235 1098 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-204ENST00000586558 PCID2Q5JVF3 399 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 ALS2CLQ60I27 953 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 C8orf74Q6P047 294 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 PARGQ86W56 976 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 HEATR4Q86WZ0 1026 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 PELI3Q8N2H9 469 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 MMGT1Q8N4V1 131 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 BBOF1Q8ND07 529 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 PPHLN1Q8NEY8 458 aaKnown RBP19.06■□□□□ 0.64
DDX39A-204ENST00000586558 STYXQ8WUJ0 223 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 FUBP1Q96AE4 644 aaKnown RBP19.06■□□□□ 0.64
DDX39A-204ENST00000586558 EDEM2Q9BV94 578 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 SPATA16Q9BXB7 569 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 RAB17Q9H0T7 212 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 NLE1Q9NVX2 485 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-204ENST00000586558 TCAF1Q9Y4C2 921 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 PCDH15Q96QU1 1955 aa19.06■□□□□ 0.64
DDX39A-204ENST00000586558 FRYLO94915 3013 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 GLYATL1P3A0A0U1RQE8 302 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 YKT6O15498 198 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 MAGEA3P43357 314 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 ARRB1P49407 418 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-204ENST00000586558 CDK3Q00526 305 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 FZD2Q14332 565 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 HLA-BQ31612 363 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 KDM7AQ6ZMT4 941 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 CAND1Q86VP6 1230 aaKnown RBP19.05■□□□□ 0.64
DDX39A-204ENST00000586558 HIC2Q96JB3 615 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 WDR92Q96MX6 357 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 SERPINB12Q96P63 405 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 ELF4Q99607 663 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-204ENST00000586558 GTPBP2Q9BX10 602 aaKnown RBP19.05■□□□□ 0.64
DDX39A-204ENST00000586558 FSCN3Q9NQT6 498 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 UTP11Q9Y3A2 253 aaKnown RBP19.05■□□□□ 0.64
DDX39A-204ENST00000586558 KCTD3Q9Y597 815 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 DOCK9Q9BZ29 2069 aa19.05■□□□□ 0.64
DDX39A-204ENST00000586558 FADS2P1A8MWK0 482 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 GOLGA8MH3BSY2 632 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 H7C0S8 307 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 TNFRSF10CO14798 259 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 ZNF883P0CG24 379 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 ITGA9Q13797 1035 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 TPRG1LQ5T0D9 272 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 TSTD2Q5T7W7 516 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 HIBCHQ6NVY1 386 aaPredicted RBP19.04■□□□□ 0.64
DDX39A-204ENST00000586558 MINDY1Q8N5J2 469 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 OR13C4Q8NGS5 318 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 COX14Q96I36 57 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 DNAJC1Q96KC8 554 aaKnown RBP19.04■□□□□ 0.64
DDX39A-204ENST00000586558 VPS35Q96QK1 796 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 AGAP2Q99490 1192 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 TRIM31Q9BZY9 425 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 GAREM1Q9H706 876 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 MRM3Q9HC36 420 aaKnown RBP19.04■□□□□ 0.64
DDX39A-204ENST00000586558 TMEM9BQ9NQ34 198 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 DNAAF2Q9NVR5 837 aaKnown RBP19.04■□□□□ 0.64
DDX39A-204ENST00000586558 WHRNQ9P202 907 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.04■□□□□ 0.64
DDX39A-204ENST00000586558 PI4KAP42356 2102 aa19.04■□□□□ 0.64
DDX39A-204ENST00000586558 MAGEB16A2A368 324 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 SDR42E2A6NKP2 422 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 GAPDHSO14556 408 aaPredicted RBP19.03■□□□□ 0.64
DDX39A-204ENST00000586558 MGAT1P26572 445 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 RPL21P46778 160 aaKnown RBP19.03■□□□□ 0.64
DDX39A-204ENST00000586558 RXRGP48443 463 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 BLKP51451 505 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 ACVR1Q04771 509 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 CALCOCO2Q13137 446 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 PTPRCAPQ14761 206 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 CCDC38Q502W7 563 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 DNTTIP2Q5QJE6 756 aaKnown RBP19.03■□□□□ 0.64
DDX39A-204ENST00000586558 DUPD1Q68J44 220 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 FAM151BQ6UXP7 276 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 PHYKPLQ8IUZ5 450 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 OR56A4Q8NGH8 313 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 GLYATL1Q969I3 302 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 KIFC1Q9BW19 673 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 LGR4Q9BXB1 951 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 L2HGDHQ9H9P8 463 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 SMOXQ9NWM0 555 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 SAMD15Q9P1V8 674 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 FKBPLQ9UIM3 349 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 ANAPC5Q9UJX4 755 aa19.03■□□□□ 0.64
DDX39A-204ENST00000586558 CNOT6Q9ULM6 557 aaKnown RBP19.03■□□□□ 0.64
DDX39A-204ENST00000586558 FNDC3AQ9Y2H6 1198 aaKnown RBP19.03■□□□□ 0.64
DDX39A-204ENST00000586558 SCN8AQ9UQD0 1980 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 RALGAPA1Q6GYQ0 2036 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 A0A1B0GTQ1 180 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 AVILO75366 819 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 PRAMEF1O95521 474 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 CSF2P04141 144 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 NME1P15531 152 aaKnown RBP19.02■□□□□ 0.64
DDX39A-204ENST00000586558 ITGALP20701 1170 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 CCT8P50990 548 aa19.02■□□□□ 0.64
DDX39A-204ENST00000586558 ITGA8P53708 1063 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms