RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CEP250Q9BV73 2442 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 A0A0J9YYE9 177 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 A0A0U1RQS6 177 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 RGSL1A5PLK6 1076 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 CAPN8A6NHC0 703 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 UPK3BL1B0FP48 263 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 UPK3BL2E5RIL1 263 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 ZNF217O75362 1048 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 BANF1O75531 89 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 RPP40O75818 363 aaKnown RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 TRBC1P01850 177 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 ACADMP11310 421 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 ZNF30P17039 623 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 LPOP22079 712 aaPredicted RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 CD6P30203 668 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 HMGCLP35914 325 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 CHRNA4P43681 627 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 PPP2R2AP63151 447 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 PRAMEP78395 509 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 SEMG2Q02383 582 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 MSLNQ13421 630 aaPredicted RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 SEPT6Q14141 434 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 TMED2Q15363 201 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 CDKN3Q16667 212 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 QPCTQ16769 361 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 TTC31Q49AM3 519 aaPredicted RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 SDCCAG8Q86SQ7 713 aaPredicted RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 TRABD2AQ86V40 505 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 KBTBD6Q86V97 674 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 CBARPQ8N350 705 aaPredicted RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 LPCAT1Q8NF37 534 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 GPR150Q8NGU9 434 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 DCAKDQ8WVC6 231 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.61□□□□□ -0.39
VMP1-202ENST00000585847 ISL2Q96A47 359 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 TOE1Q96GM8 510 aaKnown RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 OMDQ99983 421 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 APOL2Q9BQE5 337 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 FAM126AQ9BYI3 521 aaPredicted RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 PLAC1Q9HBJ0 212 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 PCDH12Q9NPG4 1184 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 PPANQ9NQ55 473 aaKnown RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 CHRAC1Q9NRG0 131 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 C20orf96Q9NUD7 363 aaPredicted RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 KCTD5Q9NXV2 234 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 CDV3Q9UKY7 258 aaKnown RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 NOVA2Q9UNW9 492 aaKnown RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 ZFR2Q9UPR6 939 aaKnown RBP12.61□□□□□ -0.39
VMP1-202ENST00000585847 PKP3Q9Y446 797 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 PLXNA2O75051 1894 aa12.61□□□□□ -0.39
VMP1-202ENST00000585847 GOLGA8CPA6NN73 597 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 PRR5-ARHGAP8B1AHC4 643 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 TM9SF1O15321 606 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 PRPF4O43172 522 aaKnown RBP eCLIP12.6□□□□□ -0.39
VMP1-202ENST00000585847 LDB2O43679 373 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 AP1G1O43747 822 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 MT-ND3P03897 115 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 ALPIP09923 528 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 CYP2A6P11509 494 aaPredicted RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 CTPS1P17812 591 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 GM2AP17900 193 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 ZNF140P52738 457 aaPredicted RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 LIMK2P53671 638 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 MAGOHP61326 146 aaKnown RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 PPP2CBP62714 309 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 PPP2CAP67775 309 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 ARHGAP8P85298 464 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 SFSWAPQ12872 951 aaKnown RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 GALNT3Q14435 633 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 DBN1Q16643 649 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 HP1BP3Q5SSJ5 553 aaPredicted RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 LYPLAL1Q5VWZ2 237 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 CERS6Q6ZMG9 384 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 CAPN12Q6ZSI9 719 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 KDELC2Q7Z4H8 507 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 SLC41A1Q8IVJ1 513 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 SLC25A41Q8N5S1 370 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 PAF1Q8N7H5 531 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 BLOC1S5Q8TDH9 187 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 PDCD6IPQ8WUM4 868 aaKnown RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 ARL8AQ96BM9 186 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 CENPTQ96BT3 561 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 SCRN2Q96FV2 425 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 ORAI3Q9BRQ5 295 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 BTBD1Q9H0C5 482 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 RHOJQ9H4E5 214 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 EBF2Q9HAK2 575 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 SGK2Q9HBY8 427 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 INTS10Q9NVR2 710 aaKnown RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 NLE1Q9NVX2 485 aaPredicted RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 NFKBIL1Q9UBC1 381 aaPredicted RBP12.6□□□□□ -0.39
VMP1-202ENST00000585847 APPL1Q9UKG1 709 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 RAB23Q9ULC3 237 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 COMMD10Q9Y6G5 202 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms