RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 HID1Q8IV36 788 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 CACTIN-AS1Q8N1I8 211 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 GALNT15Q8N3T1 639 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 EID2Q8N6I1 236 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 WDR48Q8TAF3 677 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 BRSK1Q8TDC3 778 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 LMX1AQ8TE12 382 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 C1orf54Q8WWF1 131 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 NAT6Q93015 286 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 TRIM44Q96DX7 344 aaPredicted RBP13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 MS4A14Q96JA4 679 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 TBL1YQ9BQ87 522 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 FICDQ9BVA6 458 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 RIOK2Q9BVS4 552 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 GSDMCQ9BYG8 508 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 ZCCHC2Q9C0B9 1178 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 EIF2B3Q9NR50 452 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 APPL1Q9UKG1 709 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 BTBD3Q9Y2F9 522 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 FRYLO94915 3013 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SCN8AQ9UQD0 1980 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 F5H423 210 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 K7ESM1 405 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 PGRMC1O00264 195 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 ZNF185O15231 689 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SDC3O75056 442 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 RFPL3O75679 317 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SOD1P00441 154 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 CKMT1AP12532 417 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 GDF10P55107 478 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 DAB2P98082 770 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 E2F1Q01094 437 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 ILF3Q12906 894 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SEMA5AQ13591 1074 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 PRAMEF14Q5SWL7 426 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 TPRG1LQ5T0D9 272 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 N4BP2L1Q5TBK1 243 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SLC25A45Q8N413 288 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 ACTRT1Q8TDG2 376 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 BLOC1S5Q8TDH9 187 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 GRK7Q8WTQ7 553 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 PEX13Q92968 403 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 PDXPQ96GD0 296 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 CAMK1GQ96NX5 476 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 NAPGQ99747 312 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 GORASP1Q9BQQ3 440 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SPATA16Q9BXB7 569 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 FGF22Q9HCT0 170 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SMOXQ9NWM0 555 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 IL17CQ9P0M4 197 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 SHOC2Q9UQ13 582 aa13.73□□□□□ -0.21
PRKCSH-202ENST00000585540 KLHL33A6NCF5 533 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 TMEM202A6NGA9 273 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 STX7O15400 261 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 VEGFDO43915 354 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 SUN1O94901 812 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 GIMD1P0DJR0 217 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 BPIP17213 487 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 LPOP22079 712 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 KCNA4P22459 653 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 ACADVLP49748 655 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 CDK16Q00536 496 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 CDH17Q12864 832 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 CYP1B1Q16678 543 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 KDELC2Q7Z4H8 507 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 TTC30BQ8N4P2 665 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 SLC25A41Q8N5S1 370 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 ARL10Q8N8L6 244 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 OR1E3Q8WZA6 343 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 GLYATL1Q969I3 302 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 RUNDC3BQ96NL0 473 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 BOCQ9BWV1 1114 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 CARS2Q9HA77 564 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 RNF14Q9UBS8 474 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 CD84Q9UIB8 345 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 KLF15Q9UIH9 416 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 ANGPTL2Q9UKU9 493 aa13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 ARID1BQ8NFD5 2236 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 ZNF106Q9H2Y7 1883 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-202ENST00000585540 DMXL1Q9Y485 3027 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 SPAARA0A1B0GVQ0 90 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 FAM221BA6H8Z2 402 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 E7EVH7 732 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 H7C0S8 307 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 GIPC1O14908 333 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 ZW10O43264 779 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 SIGLEC6O43699 453 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 KCNJ13O60928 360 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 IFNB1P01574 187 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 CEACAM5P06731 702 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 SLC2A4P14672 509 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 CHRNA4P43681 627 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 FNTAP49354 379 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 SNX1Q13596 522 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 NR0B2Q15466 257 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 ZNF542PQ5EBM4 170 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 RAB44Q7Z6P3 723 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms