RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 KALRNO60229 2985 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 NVLO15381 856 aaKnown RBP20.32■□□□□ 0.84
TOP3A-219ENST00000584887 ZIC2O95409 532 aaPredicted RBP20.32■□□□□ 0.84
TOP3A-219ENST00000584887 CLDN7O95471 211 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 MESDQ14696 234 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 NKAIN2Q5VXU1 208 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 ALG1LQ6GMV1 187 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 ZNF765Q7L2R6 523 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 ZNF438Q7Z4V0 828 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 C17orf82Q86X59 251 aaPredicted RBP20.32■□□□□ 0.84
TOP3A-219ENST00000584887 ZFAND4Q86XD8 727 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 CCDC13Q8IYE1 715 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 NAGSQ8N159 534 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 RCBTB1Q8NDN9 531 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 ARRDC2Q8TBH0 407 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 WBP1Q96G27 269 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 SEMA4CQ9C0C4 833 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 PCDH9Q9HC56 1237 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 FOXJ2Q9P0K8 574 aa20.32■□□□□ 0.84
TOP3A-219ENST00000584887 SMG1Q96Q15 3661 aaKnown RBP20.31■□□□□ 0.84
TOP3A-219ENST00000584887 TRBV23OR9-2A0A075B6M9 112 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 C1orf232A0A0U1RR37 186 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 LRRD1A4D1F6 860 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 KCNK1O00180 336 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 JCHAINP01591 159 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 PYGLP06737 847 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 LIPCP11150 499 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 CD86P42081 329 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 SLC10A2Q12908 348 aaPredicted RBP20.31■□□□□ 0.84
TOP3A-219ENST00000584887 SLC18A3Q16572 532 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 PYCR3Q53H96 274 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 VASH2Q86V25 355 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 NRSN1Q8IZ57 195 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 RAPGEF5Q92565 580 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 FAF2Q96CS3 445 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 CCDC74BQ96LY2 380 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 KCNK4Q9NYG8 393 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 SEPT10Q9P0V9 454 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 AMACRQ9UHK6 382 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 ZNHIT2Q9UHR6 403 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 PRKAB1Q9Y478 270 aa20.31■□□□□ 0.84
TOP3A-219ENST00000584887 PPM1DO15297 605 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 AKR1B10O60218 316 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 PRLP01236 227 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 ATP1A1P05023 1023 aaKnown RBP20.3■□□□□ 0.84
TOP3A-219ENST00000584887 CCL4P13236 92 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 PLA2G2AP14555 144 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 CD1CP29017 333 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 MANEAQ5SRI9 462 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 ZNF761Q86XN6 746 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-219ENST00000584887 EXD1Q8NHP7 514 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-219ENST00000584887 FATE1Q969F0 183 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 HDAC11Q96DB2 347 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 SCARF2Q96GP6 870 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-219ENST00000584887 ZNHIT6Q9NWK9 470 aaKnown RBP20.3■□□□□ 0.84
TOP3A-219ENST00000584887 DTLQ9NZJ0 730 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 LCMT1Q9UIC8 334 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 ACSL6Q9UKU0 697 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 PCDHB11Q9Y5F2 797 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 HEY1Q9Y5J3 304 aa20.3■□□□□ 0.84
TOP3A-219ENST00000584887 IGHV5-10-1A0A0J9YXX1 117 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 C9orf172C9J069 976 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 SLC4A1P02730 911 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 KDELR1P24390 212 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 MPSTP25325 297 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 HNRNPH3P31942 346 aaKnown RBP20.29■□□□□ 0.84
TOP3A-219ENST00000584887 MAN1A1P33908 653 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 GPR3P46089 330 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 RPL26P61254 145 aaKnown RBP20.29■□□□□ 0.84
TOP3A-219ENST00000584887 NR1D2Q14995 579 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 QPCTQ16769 361 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 FAM182AQ5T1J6 154 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 TMEM164Q5U3C3 297 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 ZNF574Q6ZN55 896 aaPredicted RBP20.29■□□□□ 0.84
TOP3A-219ENST00000584887 OR8K1Q8NGG5 319 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 RNF157Q96PX1 679 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 CEP41Q9BYV8 373 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 RPL26L1Q9UNX3 145 aaKnown RBP20.29■□□□□ 0.84
TOP3A-219ENST00000584887 CFAP46Q8IYW2 2715 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 PIEZO2Q9H5I5 2752 aa20.29■□□□□ 0.84
TOP3A-219ENST00000584887 EFSO43281 561 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 TMEM253P0C7T8 217 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 CSF2RBP32927 897 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 AP1B1Q10567 949 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 LRP8Q14114 963 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 GALNT3Q14435 633 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 CLPPQ16740 277 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-219ENST00000584887 KDELC2Q7Z4H8 507 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 NLRP8Q86W28 1048 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 CCHCR1Q8TD31 782 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 SLC37A2Q8TED4 501 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 JPH3Q8WXH2 748 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-219ENST00000584887 SGF29Q96ES7 293 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 AHCYL2Q96HN2 611 aaKnown RBP20.28■□□□□ 0.84
TOP3A-219ENST00000584887 COX14Q96I36 57 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 MLPHQ9BV36 600 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-219ENST00000584887 FAM83DQ9H4H8 585 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 PKD2L2Q9NZM6 624 aa20.28■□□□□ 0.84
TOP3A-219ENST00000584887 OAS3Q9Y6K5 1087 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms