RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 RNF215Q9Y6U7 377 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ZNFX1Q9P2E3 1918 aaKnown RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 LTN1O94822 1766 aa9.4□□□□□ -0.91
SKA2-207ENST00000583380 CROCCQ5TZA2 2017 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 PTPRJQ12913 1337 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 CCDC78A2IDD5 438 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 MROH6A6NGR9 719 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 A8MU76 341 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 EFCAB9A8MZ26 197 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 I3L521 148 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 PLOD2O00469 737 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 HRO43593 1189 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 SSX5O60225 188 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 PEX14O75381 377 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 RFPL3O75679 317 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 PRSS23O95084 383 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 PRKCBP05771 671 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 GNAO1P09471 354 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 CYP2C8P10632 490 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 TNNI3P19429 210 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 CD72P21854 359 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 PTBP1P26599 531 aaKnown RBP eCLIP9.39□□□□□ -0.911e-9■■■■■ 38.2
SKA2-207ENST00000583380 SPRP35270 261 aaPredicted RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 QARSP47897 775 aaKnown RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 CASP4P49662 377 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 GDI2P50395 445 aaKnown RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 EEFSECP57772 596 aaKnown RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 SNAP25P60880 206 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 IGBP1P78318 339 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 ROR1Q01973 937 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 GABPAQ06546 454 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 ASAH1Q13510 395 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 EFR3AQ14156 821 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 AAK1Q2M2I8 961 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 IGSF11Q5DX21 431 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 METTL11BQ5VVY1 283 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 LIPMQ5VYY2 423 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 MZT2BQ6NZ67 158 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 C8orf82Q6P1X6 216 aaPredicted RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 DARS2Q6PI48 645 aaKnown RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 MON1BQ7L1V2 547 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 KRT74Q7RTS7 529 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 EFL1Q7Z2Z2 1120 aaKnown RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 RAB44Q7Z6P3 723 aaPredicted RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 DPP9Q86TI2 863 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 SYVN1Q86TM6 617 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 DNAAF5Q86Y56 855 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 GATAD2AQ86YP4 633 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 ZDHHC13Q8IUH4 622 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 C10orf107Q8IVU9 208 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 TMEM35BQ8NCS4 154 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 CANT1Q8WVQ1 401 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 DDX1Q92499 740 aaKnown RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 USP13Q92995 863 aaPredicted RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 SLC38A4Q969I6 547 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 HDAC10Q969S8 669 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 FAF2Q96CS3 445 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 FRMD6Q96NE9 622 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 ACCSQ96QU6 501 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 TCEAL7Q9BRU2 100 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 TRMOQ9BU70 441 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 SPATA9Q9BWV2 254 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 BTBD2Q9BX70 525 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 C20orf27Q9GZN8 174 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 PDGFDQ9GZP0 370 aaPredicted RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 DCSTAMPQ9H295 470 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 KANSL2Q9H9L4 492 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 TBC1D22BQ9NU19 505 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 CACNA2D2Q9NY47 1150 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 BFARQ9NZS9 450 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 MARK1Q9P0L2 795 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 GMPR2Q9P2T1 348 aaKnown RBP9.39□□□□□ -0.91
SKA2-207ENST00000583380 OAZ3Q9UMX2 235 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 BAIAP2Q9UQB8 552 aa9.39□□□□□ -0.91
SKA2-207ENST00000583380 SLX4Q8IY92 1834 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 RBBP6Q7Z6E9 1792 aaKnown RBP9.38□□□□□ -0.91
SKA2-207ENST00000583380 USP17L12C9JPN9 530 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 USP17L21D6R901 530 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 EI24O14681 340 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 MRASO14807 208 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 TSPAN4O14817 238 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 SLC16A6O15403 523 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 SEC14L5O43304 696 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 USP12O75317 370 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 VPS4BO75351 444 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 TIPRLO75663 272 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 SORBS2O94875 1100 aaKnown RBP9.38□□□□□ -0.91
SKA2-207ENST00000583380 SEMA3DO95025 777 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 CELF2O95319 508 aaKnown RBP9.38□□□□□ -0.91
SKA2-207ENST00000583380 GSRP00390 522 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 C1QAP02745 245 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 HOXD4P09016 255 aaPredicted RBP9.38□□□□□ -0.91
SKA2-207ENST00000583380 ITGAMP11215 1152 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 HLA-EP13747 358 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 TFEBP19484 476 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 KELP23276 732 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 ADORA2AP29274 412 aa9.38□□□□□ -0.91
SKA2-207ENST00000583380 MAGEA12P43365 314 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms