RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	MRPL40	Q9NQ50	206 aa	Known RBP	12.52	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GOLGA6A	Q9NYA3	693 aa		12.52	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HACD3	Q9P035	362 aa		12.52	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SEPT10	Q9P0V9	454 aa		12.52	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FAM153A	Q9UHL3	310 aa		12.52	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	MOSPD1	Q9UJG1	213 aa		12.52	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GOLGA6L6	A8MZA4	724 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	BRINP1	O60477	761 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FUCA1	P04066	466 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PECAM1	P16284	738 aa	Predicted RBP	12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CCKBR	P32239	447 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ADCY8	P40145	1251 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	EIF2S3	P41091	472 aa	Known RBP	12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GPR3	P46089	330 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GNPDA1	P46926	289 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RWDD2B	P57060	319 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PYCR3	Q53H96	274 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LRRC69	Q6ZNQ3	347 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZNF438	Q7Z4V0	828 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TMC3	Q7Z5M5	1100 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GAS2L3	Q86XJ1	694 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	NRROS	Q86YC3	692 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GALNT13	Q8IUC8	556 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SYCE1	Q8N0S2	351 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	WDR36	Q8NI36	951 aa	Known RBP	12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LRRN4	Q8WUT4	740 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HTR3C	Q8WXA8	447 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HAUS1	Q96CS2	278 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LIN37	Q96GY3	246 aa	Predicted RBP	12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TMEM74	Q96NL1	305 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PPP1R2P1	Q96PQ5	205 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	QKI	Q96PU8	341 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	OR2M4	Q96R27	311 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FCRL5	Q96RD9	977 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	STRADB	Q9C0K7	418 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LRRN3	Q9H3W5	708 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	THSD1	Q9NS62	852 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TAAR2	Q9P1P5	351 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SIRPG	Q9P1W8	387 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LRIT1	Q9P2V4	623 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CD84	Q9UIB8	345 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PCDHB1	Q9Y5F3	818 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ENTPD2	Q9Y5L3	495 aa		12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	COL27A1	Q8IZC6	1860 aa	Predicted RBP	12.51	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	IGSF10	Q6WRI0	2623 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CCDC187	A0A096LP49	1063 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LOC285095	A0A1B0GVY8	99 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	MIF4GD	A9UHW6	222 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708		D6RAR5	112 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PPFIA2	O75334	1257 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TJP3	O95049	919 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FGF1	P05230	155 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RBMS1	P29558	406 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	NAP1L1	P55209	391 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GABRE	P78334	506 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CTBS	Q01459	385 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KIF5A	Q12840	1032 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	MPP3	Q13368	585 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SQSTM1	Q13501	440 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	NOMO1	Q15155	1222 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RAD9B	Q6WBX8	426 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RFLNA	Q6ZTI6	216 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LYSMD3	Q7Z3D4	306 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KIAA1328	Q86T90	577 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CCNJL	Q8IV13	435 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ARL14	Q8N4G2	192 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TRAM1L1	Q8N609	369 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LRRC57	Q8N9N7	239 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	AVL9	Q8NBF6	648 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZNF248	Q8NDW4	579 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZDHHC1	Q8WTX9	485 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KRT35	Q92764	455 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CCDC97	Q96F63	343 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PLEKHG4B	Q96PX9	1271 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	WDR24	Q96S15	920 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	DPYSL5	Q9BPU6	564 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GPR63	Q9BZJ6	419 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CARD9	Q9H257	536 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GOLPH3	Q9H4A6	298 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SAE1	Q9UBE0	346 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LHX6	Q9UPM6	363 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	REXO2	Q9Y3B8	237 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZNF711	Q9Y462	761 aa		12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RCCD1	A6NED2	376 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708		B4DGG1	531 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ANXA9	O76027	345 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	STK10	O94804	968 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RPLP0	P05388	317 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SLC2A4	P14672	509 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HLA-DPA1	P20036	260 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CD68	P34810	354 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HMGCL	P35914	325 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	POLD2	P49005	469 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	MARCKSL1	P49006	195 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CLCNKA	P51800	687 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	INHBC	P55103	352 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms