RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TNFAIP3P21580 790 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 RPL13P26373 211 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 SUOXP51687 545 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 VAV2P52735 878 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 PPP1CAP62136 330 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 ENPEPQ07075 957 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 TUBB3Q13509 450 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 PTPRRQ15256 657 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 CYTH1Q15438 398 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 SKOR2Q2VWA4 1001 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 PRAMEF17Q5VTA0 474 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 Q6ZS92 163 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 FAM131BQ86XD5 332 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 TGIF2LYQ8IUE0 185 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 TTC30BQ8N4P2 665 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 WDTC1Q8N5D0 677 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 PAF1Q8N7H5 531 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 LINC00301Q8NCQ3 95 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 CHTF18Q8WVB6 975 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 RELTQ969Z4 430 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 SGSM3Q96HU1 749 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 NT5C1BQ96P26 610 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 GTPBP4Q9BZE4 634 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 MCCC2Q9HCC0 563 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 SARS2Q9NP81 518 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 CNOT8Q9UFF9 292 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 MFHAS1Q9Y4C4 1052 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 CSPG4Q6UVK1 2322 aa13.91□□□□□ -0.18
CSNK1D-213ENST00000580446 PRRC2AP48634 2157 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 FLNAP21333 2647 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 FAM72CH0Y354 149 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 DDX3YO15523 660 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 C9P02748 559 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 IVLP07476 585 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 EPB41P11171 864 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 OTX2P32243 289 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 ETV3P41162 512 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 RGRP47804 291 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 GEMIN4P57678 1058 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 FOXD4Q12950 439 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 NFIL3Q16649 462 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 DCAF10Q5QP82 559 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 FAM72AQ5TYM5 149 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 CACHD1Q5VU97 1274 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 RAET1GQ6H3X3 334 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 FAM72DQ6L9T8 149 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 RFLNAQ6ZTI6 216 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 ZNF765Q7L2R6 523 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 FAM72BQ86X60 149 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 CBARPQ8N350 705 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 ZADH2Q8N4Q0 377 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 ZNF808Q8N4W9 903 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 SLC38A9Q8NBW4 561 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 FAR1Q8WVX9 515 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 C1orf74Q96LT6 269 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 KREMEN1Q96MU8 473 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 C5AR2Q9P296 337 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 ATRQ13535 2644 aa13.9□□□□□ -0.18
CSNK1D-213ENST00000580446 CCL21O00585 134 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 ACTN4O43707 911 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 KDELR3O43731 214 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 RAMP2O60895 175 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 GLI1P08151 1106 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 EBLN1P0CF75 366 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 EPHA4P54764 986 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 MTA1Q13330 715 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 ZNF235Q14590 738 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 ZCWPW2Q504Y3 356 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 PYCR3Q53H96 274 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 MED25Q71SY5 747 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 DPPA4Q7L190 304 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 HSD11B1LQ7Z5J1 315 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 NLRP14Q86W24 1093 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 SMYD4Q8IYR2 804 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 TMEM102Q8N9M5 508 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 RSC1A1Q92681 617 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 CNDP1Q96KN2 507 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 COQ10AQ96MF6 247 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 ZNF552Q9H707 407 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 ASNSD1Q9NWL6 643 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 SUCOQ9UBS9 1254 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 B4GALT6Q9UBX8 382 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 CD84Q9UIB8 345 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 RARRES3Q9UL19 164 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 TCFL5Q9UL49 500 aa13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 NSD1Q96L73 2696 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-213ENST00000580446 FBN1P35555 2871 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 MDC1Q14676 2089 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 JRKO75564 520 aa13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 ETFBP38117 255 aa13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 MARSP56192 900 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 MCCD1P59942 119 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 PPP2R2AP63151 447 aa13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 CDC16Q13042 620 aa13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 CNGA3Q16281 694 aa13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 AFMIDQ63HM1 303 aa13.88□□□□□ -0.19
CSNK1D-213ENST00000580446 IRGCQ6NXR0 463 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms