RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 OR2M4Q96R27 311 aa14.42□□□□□ -0.1
SMARCE1-216ENST00000580419 CCNL2Q96S94 520 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-216ENST00000580419 DEF6Q9H4E7 631 aa14.42□□□□□ -0.1
SMARCE1-216ENST00000580419 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
SMARCE1-216ENST00000580419 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-216ENST00000580419 C3orf70A6NLC5 250 aaPredicted RBP14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 RHPN2P1A8MT19 583 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 B4DGG1 531 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 B4GAT1O43505 415 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 AKR1B10O60218 316 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 MMP2P08253 660 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 JMJD7P0C870 316 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 LIPCP11150 499 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 SLC5A2P31639 672 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 SPINT3P49223 89 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 DSC2Q02487 901 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 GBE1Q04446 702 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 ITKQ08881 620 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 TAZQ16635 292 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 TMEM164Q5U3C3 297 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 NYAP1Q6ZVC0 841 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 DTX1Q86Y01 620 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 CNGA4Q8IV77 575 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 VSTM4Q8IW00 320 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 SFRP1Q8N474 314 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 OR4D9Q8NGE8 314 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 CCHCR1Q8TD31 782 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 RAPGEF5Q92565 580 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 CCDC42Q96M95 316 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 OLFM3Q96PB7 478 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 MLPHQ9BV36 600 aaPredicted RBP14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 EPB41L1Q9H4G0 881 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 MAGEE1Q9HCI5 957 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 EPB41L5Q9HCM4 733 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 DDX56Q9NY93 547 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 LOXL2Q9Y4K0 774 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 ST14Q9Y5Y6 855 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 BOD1L1Q8NFC6 3051 aa14.41□□□□□ -0.1
SMARCE1-216ENST00000580419 OR5K4A6NMS3 321 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 PPP1R12AO14974 1030 aaPredicted RBP14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 MTSS1O43312 755 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 MFAP3LO75121 409 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 ECEL1O95672 775 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 ITGB2P05107 769 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 HLA-DQB2P05538 268 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 SLC2A4P14672 509 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 CTPS1P17812 591 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 CD1CP29017 333 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 GNPDA1P46926 289 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 LIMK2P53671 638 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 NIPAL4Q0D2K0 466 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 GALNT13Q8IUC8 556 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 CNTD1Q8N815 330 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 SCAMP4Q969E2 229 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 SH3KBP1Q96B97 665 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 IMP4Q96G21 291 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 TRIB3Q96RU7 358 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 WDR24Q96S15 920 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 HERPUD2Q9BSE4 406 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 PACSIN1Q9BY11 444 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 SLC25A51Q9H1U9 297 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 CARD9Q9H257 536 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 FAM83DQ9H4H8 585 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 SARS2Q9NP81 518 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 PKD2L2Q9NZM6 624 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 SEPT10Q9P0V9 454 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 MOSPD1Q9UJG1 213 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 CHKBQ9Y259 395 aa14.4□□□□□ -0.1
SMARCE1-216ENST00000580419 SDK2Q58EX2 2172 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 DNAJC6O75061 913 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 C1QL1O75973 258 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 EPOP01588 193 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 EPHA4P54764 986 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 QPCTQ16769 361 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 DENND2CQ68D51 928 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 WDR74Q6RFH5 385 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 CCDC81Q6ZN84 652 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 CCNYQ8ND76 341 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 NAF1Q96HR8 494 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 CALR3Q96L12 384 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 ZSCAN5AQ9BUG6 496 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 RIOK2Q9BVS4 552 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 FOXP3Q9BZS1 431 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 NHEJ1Q9H9Q4 299 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 UCK1Q9HA47 277 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 CPNE5Q9HCH3 593 aa14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-216ENST00000580419 IGHV1OR21-1A0A087WYE8 117 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 KIR2DS5A0A0G2JLQ3 304 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 A0A0G2JNG1 304 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 C1orf232A0A0U1RR37 186 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 LRRD1A4D1F6 860 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 A6NCN8 305 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 B4E171 279 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 KIR2DS3K7RE56 304 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 APOL1O14791 398 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 CASC3O15234 703 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 CLDN7O95471 211 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms