RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 HIST2H2BCQ6DN03 193 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 C6orf15Q6UXA7 325 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ADAMTSL4Q6UY14 1074 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 LYSMD3Q7Z3D4 306 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC9B2Q86UD5 537 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 NLRP8Q86W28 1048 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 GALNT13Q8IUC8 556 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 APLFQ8IW19 511 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 NDUFAF2Q8N183 169 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SCRN2Q96FV2 425 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CELF6Q96J87 481 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZNF599Q96NL3 588 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC39A8Q9C0K1 460 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 TLK1Q9UKI8 766 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PHTF1Q9UMS5 762 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 OR5K4A6NMS3 321 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 EEF2KO00418 725 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 TOX3O15405 576 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CCNYL3P0C7X3 344 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 UNGP13051 313 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 NR1D1P20393 614 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 VARSP26640 1264 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 FOXM1Q08050 763 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PTP4A2Q12974 167 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZNF235Q14590 738 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 IL11RAQ14626 422 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 RALGPS1Q5JS13 557 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MIIPQ5JXC2 388 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CYB5D1Q6P9G0 228 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DOK6Q6PKX4 331 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 Q6ZVL8 140 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 USP45Q70EL2 814 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZNF761Q86XN6 746 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PHF13Q86YI8 300 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 BBS5Q8N3I7 341 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC20A1Q8WUM9 679 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PTCD2Q8WV60 388 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 STAMBPL1Q96FJ0 436 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MCCC1Q96RQ3 725 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 HERPUD2Q9BSE4 406 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SIDT1Q9NXL6 827 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CROTQ9UKG9 612 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PCDHGA6Q9Y5G7 932 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MRPS18BQ9Y676 258 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
CDK5RAP3-216ENST00000579853 TRBV23OR9-2A0A075B6M9 112 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 KIR2DS5A0A0G2JLQ3 304 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 A0A0G2JNG1 304 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 K7EM74 188 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 KIR2DS3K7RE56 304 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DFFAO00273 331 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 GFPT2O94808 682 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MT-ND3P03897 115 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CHRNB2P17787 502 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 GARSP41250 739 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZNF135P52742 658 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 KIR2DS5Q14953 304 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SYCP1Q15431 976 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DCUN1D2Q6PH85 259 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 IYDQ6PHW0 289 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZNF765Q7L2R6 523 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 HSD11B1LQ7Z5J1 315 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 EXD1Q8NHP7 514 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 AP2M1Q96CW1 435 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 VPS18Q9P253 973 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CNOT8Q9UFF9 292 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 AP4E1Q9UPM8 1137 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PLEKHM1Q9Y4G2 1056 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PCDHGC4Q9Y5F7 938 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 OAS3Q9Y6K5 1087 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PDZD2O15018 2839 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 POLEQ07864 2286 aa12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MN1Q10571 1320 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MTORP42345 2549 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PIPSLA2A3N6 862 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CDC14CA4D256 554 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 LILRA5A6NI73 299 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 C21orf140B9A014 251 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 KATNA1O75449 491 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CREG1O75629 220 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZNF30P17039 623 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 LHCGRP22888 699 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 F8A1P23610 371 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CASP14P31944 242 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SOX5P35711 763 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 NFATC2Q13469 925 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SEMA5AQ13591 1074 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 TECPR1Q7Z6L1 1165 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 RASGRP3Q8IV61 690 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ARHGAP12Q8IWW6 846 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms