RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 NRROSQ86YC3 692 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 NAGSQ8N159 534 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 RFLNBQ8N5W9 214 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 PCDH20Q8N6Y1 951 aaKnown RBP5.2□□□□□ -1.58
NUP88-213ENST00000576862 LNX1Q8TBB1 728 aaPredicted RBP5.2□□□□□ -1.58
NUP88-213ENST00000576862 SLC20A1Q8WUM9 679 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 ABTB1Q969K4 478 aaPredicted RBP5.2□□□□□ -1.58
NUP88-213ENST00000576862 RRNAD1Q96FB5 475 aaKnown RBP5.2□□□□□ -1.58
NUP88-213ENST00000576862 TMEM68Q96MH6 324 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 CMKLR1Q99788 373 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 TUBA1CQ9BQE3 449 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 PCGF1Q9BSM1 259 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 UBA5Q9GZZ9 404 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 CSTL1Q9H114 145 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 UBTD1Q9HAC8 227 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 SLC28A3Q9HAS3 691 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 TMEM30AQ9NV96 361 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 AASSQ9UDR5 926 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 EGFP01133 1207 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 PSMA4P25789 261 aaKnown RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 CORO1AP31146 461 aaKnown RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 CLCN3P51790 818 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 DLX5P56178 289 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 CSNK2A1P68400 391 aaPredicted RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 RELQ04864 619 aaPredicted RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 ZNF718Q3SXZ3 478 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 ZNF672Q499Z4 452 aaPredicted RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 KCNT1Q5JUK3 1230 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 FRG2Q64ET8 278 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 PXKQ7Z7A4 578 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 NR2C2APQ86WQ0 139 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 TMEM219Q86XT9 240 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 C1orf87Q8N0U7 546 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 SRBD1Q8N5C6 995 aaKnown RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 PAF1Q8N7H5 531 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 CSNK2A3Q8NEV1 391 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 HMGCLL1Q8TB92 370 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 ORAI1Q96D31 301 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 ORC3Q9UBD5 711 aaPredicted RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 LIMA1Q9UHB6 759 aaKnown RBP5.19□□□□□ -1.58
NUP88-213ENST00000576862 PADI3Q9ULW8 664 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 VDAC3Q9Y277 283 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 KIF21BO75037 1637 aa5.19□□□□□ -1.58
NUP88-213ENST00000576862 ABCA10Q8WWZ4 1543 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 C1orf226A1L170 272 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 CENPBP07199 599 aaPredicted RBP5.18□□□□□ -1.58
NUP88-213ENST00000576862 HSPA1AP0DMV8 641 aaKnown RBP5.18□□□□□ -1.58
NUP88-213ENST00000576862 HSPA1BP0DMV9 641 aaKnown RBP5.18□□□□□ -1.58
NUP88-213ENST00000576862 TNFAIP3P21580 790 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 MAN1A1P33908 653 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 TMPOP42166 694 aaKnown RBP5.18□□□□□ -1.58
NUP88-213ENST00000576862 MED22Q15528 200 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 TTI2Q6NXR4 508 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 DSTYKQ6XUX3 929 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 CACNA2D4Q7Z3S7 1137 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 FRMD1Q8N878 549 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 UCMAQ8WVF2 138 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 APBB2Q92870 758 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 ARHGEF26Q96DR7 871 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 TTC14Q96N46 770 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 PDZD7Q9H5P4 517 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 EVA1AQ9H8M9 152 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 RANGRFQ9HD47 186 aaPredicted RBP5.18□□□□□ -1.58
NUP88-213ENST00000576862 OLA1Q9NTK5 396 aaKnown RBP5.18□□□□□ -1.58
NUP88-213ENST00000576862 DONSONQ9NYP3 566 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 ACSL5Q9ULC5 683 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 LOXL2Q9Y4K0 774 aa5.18□□□□□ -1.58
NUP88-213ENST00000576862 TDRD9Q8NDG6 1382 aaKnown RBP5.17□□□□□ -1.58
NUP88-213ENST00000576862 CLIP1P30622 1438 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 SPINT2O43291 252 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 BUB3O43684 328 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 LDB3O75112 727 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 F7P08709 466 aaPredicted RBP5.17□□□□□ -1.58
NUP88-213ENST00000576862 ITGA2P17301 1181 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 HOXC9P31274 260 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 FASLGP48023 281 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 FUT6P51993 359 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 ZNF132P52740 706 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 POU3F1Q03052 451 aaPredicted RBP5.17□□□□□ -1.58
NUP88-213ENST00000576862 FOXM1Q08050 763 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 GRIK2Q13002 908 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 DDX10Q13206 875 aaKnown RBP5.17□□□□□ -1.58
NUP88-213ENST00000576862 RALBP1Q15311 655 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 ZRSR1Q15695 479 aaKnown RBP5.17□□□□□ -1.58
NUP88-213ENST00000576862 DECR1Q16698 335 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 SOWAHCQ53LP3 525 aaPredicted RBP5.17□□□□□ -1.58
NUP88-213ENST00000576862 BRAT1Q6PJG6 821 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 SFR1Q86XK3 245 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 ARHGAP12Q8IWW6 846 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 POC1AQ8NBT0 407 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 OR5R1Q8NH85 324 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 SECTM1Q8WVN6 248 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 MTERF1Q99551 399 aaKnown RBP5.17□□□□□ -1.58
NUP88-213ENST00000576862 KLHL1Q9NR64 748 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 PADI1Q9ULC6 663 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 AMDHD2Q9Y303 409 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 CLIC4Q9Y696 253 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 MAU2Q9Y6X3 613 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 MRC2Q9UBG0 1479 aa5.17□□□□□ -1.58
NUP88-213ENST00000576862 ERICH3Q5RHP9 1530 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms