RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 RAET1GQ6H3X3 334 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 CCDC137Q6PK04 289 aaKnown RBP7.88□□□□□ -1.15
CCDC40-215ENST00000576033 ZDHHC24Q6UX98 284 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 FAM151BQ6UXP7 276 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 MARK2Q7KZI7 788 aaKnown RBP7.88□□□□□ -1.15
CCDC40-215ENST00000576033 GSTA5Q7RTV2 222 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 GLT6D1Q7Z4J2 308 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 KLHDC8BQ8IXV7 354 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 KRT222Q8N1A0 295 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 OR13C4Q8NGS5 318 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 OR1E3Q8WZA6 343 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 LYSMD1Q96S90 227 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 VAT1Q99536 393 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 FRMD8P1Q9BZ68 369 aaPredicted RBP7.88□□□□□ -1.15
CCDC40-215ENST00000576033 RAB17Q9H0T7 212 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 TMEM9BQ9NQ34 198 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 GRHL1Q9NZI5 618 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 SUSD2Q9UGT4 822 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 NFU1Q9UMS0 254 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 DMTF1Q9Y222 760 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 TMEM98Q9Y2Y6 226 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 PRKAB1Q9Y478 270 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 PLEKHM1Q9Y4G2 1056 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 ST14Q9Y5Y6 855 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 ZFC3H1O60293 1989 aaKnown RBP7.88□□□□□ -1.15
CCDC40-215ENST00000576033 COL27A1Q8IZC6 1860 aaPredicted RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 FRYQ5TBA9 3013 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CELSR3Q9NYQ7 3312 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CACNA1AO00555 2505 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CFAP69A5D8W1 941 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 OR51F1A6NGY5 319 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 H3BQF6 201 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 GOLGA8MH3BSY2 632 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 AGPSO00116 658 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 FFAR2O15552 330 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 SH3BP5O60239 455 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 LRP3O75074 770 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 AVILO75366 819 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 STK10O94804 968 aaKnown RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 KRT14P02533 472 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 APRTP07741 180 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 FAM153BP0C7A2 387 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CA4P22748 312 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 EPHA8P29322 1005 aaPredicted RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 SPINT3P49223 89 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 GPS1Q13098 491 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 SEMA5AQ13591 1074 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 PTK6Q13882 451 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 TEAD4Q15561 434 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 SLC14A2Q15849 920 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 ZNF423Q2M1K9 1284 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 PARP6Q2NL67 630 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 PLA2G4EQ3MJ16 856 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 FAM153CQ494X1 144 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 HENMT1Q5T8I9 393 aaKnown RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 ESRP1Q6NXG1 681 aaKnown RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 PNCKQ6P2M8 343 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 RANBP10Q6VN20 620 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 KANSL1Q7Z3B3 1105 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 RD3Q7Z3Z2 195 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 TMC3Q7Z5M5 1100 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 IQCKQ8N0W5 287 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 AGGF1Q8N302 714 aaeCLIP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 MPP5Q8N3R9 675 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 MFSD2AQ8NA29 543 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 DENND6BQ8NEG7 585 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 DEFB124Q8NES8 71 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CCL4L1Q8NHW4 92 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CEP76Q8TAP6 659 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 AP2M1Q96CW1 435 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 KLHDC7BQ96G42 594 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 DNAJC1Q96KC8 554 aaKnown RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 ZNF778Q96MU6 729 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 PWWP2AQ96N64 755 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 ELF4Q99607 663 aaPredicted RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 SH3GL2Q99962 352 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 APOOQ9BUR5 198 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 LRRC61Q9BV99 259 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 ADGRE3Q9BY15 652 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 GPR63Q9BZJ6 419 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 FAM96AQ9H5X1 160 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 ZFYVE1Q9HBF4 777 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 TM7SF3Q9NS93 570 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 DNAJC28Q9NX36 388 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 IL1RAPL1Q9NZN1 696 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 SLC2A6Q9UGQ3 507 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 FKBPLQ9UIM3 349 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CNOT6Q9ULM6 557 aaKnown RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 UTP11Q9Y3A2 253 aaKnown RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 ARID1BQ8NFD5 2236 aaPredicted RBP7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CABIN1Q9Y6J0 2220 aa7.87□□□□□ -1.15
CCDC40-215ENST00000576033 CNOT1A5YKK6 2376 aaKnown RBP7.86□□□□□ -1.15
CCDC40-215ENST00000576033 SPTY2D1-AS1A0A0U1RR47 76 aa7.86□□□□□ -1.15
CCDC40-215ENST00000576033 A0A1B0GTQ1 180 aa7.86□□□□□ -1.15
CCDC40-215ENST00000576033 LDB2O43679 373 aa7.86□□□□□ -1.15
CCDC40-215ENST00000576033 UGT1A9O60656 530 aa7.86□□□□□ -1.15
CCDC40-215ENST00000576033 PPFIA2O75334 1257 aa7.86□□□□□ -1.15
CCDC40-215ENST00000576033 ANXA9O76027 345 aa7.86□□□□□ -1.15
CCDC40-215ENST00000576033 ECEL1O95672 775 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms