RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 Q6ZVL8 140 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 HSD11B1LQ7Z5J1 315 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 PHF13Q86YI8 300 aaPredicted RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 APLFQ8IW19 511 aaPredicted RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 RAVER1Q8IY67 606 aaKnown RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 PDCD6IPQ8WUM4 868 aaKnown RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 SLC20A1Q8WUM9 679 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 AP2M1Q96CW1 435 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 STAMBPL1Q96FJ0 436 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 TWSG1Q9GZX9 223 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 CNOT8Q9UFF9 292 aaKnown RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 CROTQ9UKG9 612 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 TLK1Q9UKI8 766 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 PCDHGA6Q9Y5G7 932 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 ST14Q9Y5Y6 855 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 OTOGQ6ZRI0 2925 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 RP1L1Q8IWN7 2480 aaPredicted RBP8.93□□□□□ -0.98
SMG6-218ENST00000575454 CELSR1Q9NYQ6 3014 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 TRBV23OR9-2A0A075B6M9 112 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 KIR2DS5A0A0G2JLQ3 304 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 A0A0G2JNG1 304 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 PIPSLA2A3N6 862 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 C21orf140B9A014 251 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 KIR2DS3K7RE56 304 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 KATNA1O75449 491 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 CHRNB2P17787 502 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 SOX5P35711 763 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 GARSP41250 739 aaKnown RBP8.93□□□□□ -0.98
SMG6-218ENST00000575454 UQCRFS1P47985 274 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 PGDP52209 483 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 FOXM1Q08050 763 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 PTP4A2Q12974 167 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 KIR2DS5Q14953 304 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 CLEC16AQ2KHT3 1053 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 ARMC12Q5T9G4 340 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 RFX8Q6ZV50 586 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 MARK2Q7KZI7 788 aaKnown RBP8.93□□□□□ -0.98
SMG6-218ENST00000575454 ZNF765Q7L2R6 523 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 TECPR1Q7Z6L1 1165 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 ZNF761Q86XN6 746 aaPredicted RBP8.93□□□□□ -0.98
SMG6-218ENST00000575454 PSTKQ8IV42 348 aaKnown RBP8.93□□□□□ -0.98
SMG6-218ENST00000575454 EXD1Q8NHP7 514 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 NSMCE1Q8WV22 266 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 THAP4Q8WY91 577 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 MCCC1Q96RQ3 725 aaPredicted RBP8.93□□□□□ -0.98
SMG6-218ENST00000575454 NUDCD1Q96RS6 583 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 VPS16Q9H269 839 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 RMI1Q9H9A7 625 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 UCK1Q9HA47 277 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 APMAPQ9HDC9 416 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 VPS18Q9P253 973 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 KLHL3Q9UH77 587 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 ZNHIT2Q9UHR6 403 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 DNPEPQ9ULA0 475 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 PADI1Q9ULC6 663 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 AP4E1Q9UPM8 1137 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 TMEM98Q9Y2Y6 226 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 PPIL1Q9Y3C6 166 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 PCDHGC4Q9Y5F7 938 aa8.93□□□□□ -0.98
SMG6-218ENST00000575454 ICE1Q9Y2F5 2266 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 MN1Q10571 1320 aaPredicted RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 CDC14CA4D256 554 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 GOLGA6L3A6NEY3 463 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 LILRA5A6NI73 299 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 K7EM74 188 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 LRCH4O75427 683 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 CREG1O75629 220 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 ASMTLO95671 621 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 TPM2P07951 284 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 ZNF30P17039 623 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 ERCC2P18074 760 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 NR1D1P20393 614 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 LHCGRP22888 699 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 F8A1P23610 371 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 EEF1GP26641 437 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 CASP14P31944 242 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 MAPK9P45984 424 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 HCAR3P49019 387 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 SEMA5AQ13591 1074 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMG6-218ENST00000575454 ERMARDQ5T6L9 678 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 HIST2H2BCQ6DN03 193 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 PPP1R2P3Q6NXS1 205 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 MAMDC2Q7Z304 686 aaPredicted RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 HPS6Q86YV9 775 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 RASGRP3Q8IV61 690 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 ARHGAP12Q8IWW6 846 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 GALNT6Q8NCL4 622 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 PTCD2Q8WV60 388 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 C9orf72Q96LT7 481 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 MCEEQ96PE7 176 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 GPR87Q9BY21 358 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 SLC29A3Q9BZD2 475 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 DHX35Q9H5Z1 703 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 NOD2Q9HC29 1040 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 SIDT1Q9NXL6 827 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 G3BP2Q9UN86 482 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 PLEKHM1Q9Y4G2 1056 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 MAP4K5Q9Y4K4 846 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms