RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CDKL3Q8IVW4 592 aaPredicted RBP8.63□□□□□ -1.03
SMG6-216ENST00000575176 NRSN1Q8IZ57 195 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 SYCE1Q8N0S2 351 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 DCBLD1Q8N8Z6 715 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 CCDC110Q8TBZ0 833 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 GPBAR1Q8TDU6 330 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 LMX1AQ8TE12 382 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 AP2M1Q96CW1 435 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 TSGA10Q9BZW7 698 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 CARD9Q9H257 536 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 IL17CQ9P0M4 197 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 KLHL8Q9P2G9 620 aaPredicted RBP8.63□□□□□ -1.03
SMG6-216ENST00000575176 KLQ9UEF7 1012 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 FAM153AQ9UHL3 310 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 SUFUQ9UMX1 484 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 PLEKHM1Q9Y4G2 1056 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 UNC13CQ8NB66 2214 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 PTPRQQ9UMZ3 2332 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 FAM149AA5PLN7 773 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 USP27XA6NNY8 438 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 H3BM21 787 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 TAF4O00268 1085 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 NTN3O00634 580 aaPredicted RBP8.62□□□□□ -1.03
SMG6-216ENST00000575176 KCNN4O15554 427 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 KRT86O43790 486 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 TJP3O95049 919 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 RASGRP1O95267 797 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 AGTP01019 485 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 GP1BAP07359 652 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 CCDC175P0C221 793 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 CA4P22748 312 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 PSMA3P25788 255 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 HMGCLP35914 325 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ZNF140P52738 457 aaPredicted RBP8.62□□□□□ -1.03
SMG6-216ENST00000575176 MPP3Q13368 585 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ILKQ13418 452 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ARHGEF7Q14155 803 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 HLTFQ14527 1009 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMG6-216ENST00000575176 PTPRCAPQ14761 206 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 NR1D2Q14995 579 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 PYCR3Q53H96 274 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 RAET1GQ6H3X3 334 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ENPP7Q6UWV6 458 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 UNQ6494/PRO21346Q6UXR6 183 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 KDELC2Q7Z4H8 507 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ZNF438Q7Z4V0 828 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 C11orf96Q7Z7L8 435 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 PRUNE1Q86TP1 453 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 HID1Q8IV36 788 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ZNF547Q8IVP9 402 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 FSTL5Q8N475 847 aaPredicted RBP8.62□□□□□ -1.03
SMG6-216ENST00000575176 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
SMG6-216ENST00000575176 BTN2A2Q8WVV5 523 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 TMEM121Q9BTD3 319 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 ARNT2Q9HBZ2 717 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 LZTFL1Q9NQ48 299 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 KCTD5Q9NXV2 234 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 SPASTQ9UBP0 616 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 RSPH14Q9UHP6 348 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 TRHDEQ9UKU6 1024 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 SHOC2Q9UQ13 582 aa8.62□□□□□ -1.03
SMG6-216ENST00000575176 APOBEC2Q9Y235 224 aaKnown RBP8.62□□□□□ -1.03
SMG6-216ENST00000575176 PMS2P1A4D2B8 440 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 RGSL1A5PLK6 1076 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 AGAP14A8MT82 685 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 H7C0C1 242 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 CACNB4O00305 520 aaPredicted RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 CHUKO15111 745 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 INPP4BO15327 924 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 SGTAO43765 313 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 USP12O75317 370 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 SNRNP200O75643 2136 aaKnown RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 ATP1A1P05023 1023 aaKnown RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 FGF1P05230 155 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 HLA-DPA1P20036 260 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 AK4P27144 223 aaPredicted RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 ADCY8P40145 1251 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 ATP5OP48047 213 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 EPHB1P54762 984 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 NAP1L1P55209 391 aaKnown RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 XIAPP98170 497 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 ZNF658BQ4V348 819 aaPredicted RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 CERCAMQ5T4B2 595 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 ZNF648Q5T619 568 aaPredicted RBP8.61□□□□□ -1.03
SMG6-216ENST00000575176 FAXCQ5TGI0 409 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 HES3Q5TGS1 186 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 LVRNQ6Q4G3 990 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 TMPRSS9Q7Z410 1059 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 NAGSQ8N159 534 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 CACTIN-AS1Q8N1I8 211 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 UBL4BQ8N7F7 174 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 ARL10Q8N8L6 244 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 FAM71DQ8N9W8 422 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 IPMKQ8NFU5 416 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 IFI44Q8TCB0 444 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 DTX3LQ8TDB6 740 aa8.61□□□□□ -1.03
SMG6-216ENST00000575176 PATE1Q8WXA2 126 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms