RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SPATA16Q9BXB7 569 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 CNTNAP3Q9BZ76 1288 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 RAD18Q9NS91 495 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 NCKIPSDQ9NZQ3 722 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 GULP1Q9UBP9 304 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 SUFUQ9UMX1 484 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 GPR34Q9UPC5 381 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 MSRB2Q9Y3D2 182 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 U3KQA8 63 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 CPED1A4D0V7 1026 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 FUCA1P04066 466 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 FGF1P05230 155 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 RPIAP49247 311 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 CLDN6P56747 220 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 MARK2Q7KZI7 788 aaKnown RBP20.55■□□□□ 0.88
CHMP6-204ENST00000572778 GALNT15Q8N3T1 639 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 BLOC1S5Q8TDH9 187 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 PTCD2Q8WV60 388 aaKnown RBP20.55■□□□□ 0.88
CHMP6-204ENST00000572778 C1orf54Q8WWF1 131 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 APOL2Q9BQE5 337 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 BOCQ9BWV1 1114 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 TRABDQ9H4I3 376 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 BPIFA1Q9NP55 256 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 SIRPGQ9P1W8 387 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 SLC17A4Q9Y2C5 497 aa20.55■□□□□ 0.88
CHMP6-204ENST00000572778 FAM149AA5PLN7 773 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 FADS2P1A8MWK0 482 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 BPIP17213 487 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 GDF10P55107 478 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 E2F1Q01094 437 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 OLIG2Q13516 323 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 SMAD1Q15797 465 aaKnown RBP20.54■□□□□ 0.88
CHMP6-204ENST00000572778 GLT6D1Q7Z4J2 308 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 MARCH9Q86YJ5 346 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 SLC35F3Q8IY50 421 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 FAM46DQ8NEK8 389 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 CCL4L1Q8NHW4 92 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 IFI44Q8TCB0 444 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 COX14Q96I36 57 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 PPP1R2P1Q96PQ5 205 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 TLR10Q9BXR5 811 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 FRMD8P1Q9BZ68 369 aaPredicted RBP20.54■□□□□ 0.88
CHMP6-204ENST00000572778 CDH19Q9H159 772 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 HACD3Q9P035 362 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 GPSM3Q9Y4H4 160 aa20.54■□□□□ 0.88
CHMP6-204ENST00000572778 FAM221BA6H8Z2 402 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 LIASO43766 372 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 ATP1A1P05023 1023 aaKnown RBP20.53■□□□□ 0.88
CHMP6-204ENST00000572778 IVLP07476 585 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 JUPP14923 745 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 DCDC1P59894 354 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 SNX1Q13596 522 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 SPARCL1Q14515 664 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 PARP6Q2NL67 630 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 GUSBP11Q6P575 273 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 CCNI2Q6ZMN8 369 aaPredicted RBP20.53■□□□□ 0.88
CHMP6-204ENST00000572778 EFL1Q7Z2Z2 1120 aaKnown RBP20.53■□□□□ 0.88
CHMP6-204ENST00000572778 TMPRSS12Q86WS5 348 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 TTC30BQ8N4P2 665 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 LRRC45Q96CN5 670 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 KCNF1Q9H3M0 494 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 CNOT6Q9ULM6 557 aaKnown RBP20.53■□□□□ 0.88
CHMP6-204ENST00000572778 ZNF148Q9UQR1 794 aa20.53■□□□□ 0.88
CHMP6-204ENST00000572778 OAS3Q9Y6K5 1087 aaKnown RBP20.53■□□□□ 0.88
CHMP6-204ENST00000572778 TDRD6O60522 2096 aaKnown RBP20.53■□□□□ 0.88
CHMP6-204ENST00000572778 ZSCAN12O43309 604 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 CEP104O60308 925 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 USP12O75317 370 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 METTL18O95568 372 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 ADRA1AP35348 466 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 HMGCLP35914 325 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 ILF3Q12906 894 aaKnown RBP eCLIP20.52■□□□□ 0.88
CHMP6-204ENST00000572778 ZNF569Q5MCW4 686 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 HES3Q5TGS1 186 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 RANBP10Q6VN20 620 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 TAB3Q8N5C8 712 aaPredicted RBP20.52■□□□□ 0.88
CHMP6-204ENST00000572778 TRAM1L1Q8N609 369 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 ARL10Q8N8L6 244 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 KYQ8NBH2 561 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 ZSCAN5AQ9BUG6 496 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 GSDMCQ9BYG8 508 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 ABCG4Q9H172 646 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 DPEP2Q9H4A9 486 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 TRNAU1APQ9NX07 287 aaKnown RBP20.52■□□□□ 0.88
CHMP6-204ENST00000572778 PADI4Q9UM07 663 aa20.52■□□□□ 0.88
CHMP6-204ENST00000572778 EME2A4GXA9 379 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-204ENST00000572778 C1QTNF9BB2RNN3 333 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 B4DGG1 531 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 BUD23O43709 281 aaKnown RBP20.51■□□□□ 0.87
CHMP6-204ENST00000572778 GP1BAP07359 652 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 C1QTNF9P0C862 333 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 STIP1P31948 543 aaKnown RBP20.51■□□□□ 0.87
CHMP6-204ENST00000572778 CXCR5P32302 372 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 ADCY8P40145 1251 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 OASLQ15646 514 aaKnown RBP20.51■□□□□ 0.87
CHMP6-204ENST00000572778 UNQ6494/PRO21346Q6UXR6 183 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 GALNT13Q8IUC8 556 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 REXO1L1PQ8IX06 675 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 MAPK15Q8TD08 544 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 GPBAR1Q8TDU6 330 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms