RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SNX1Q13596 522 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 IHHQ14623 411 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 SHBQ15464 509 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 TCEA2Q15560 299 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 LONRF2Q1L5Z9 754 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 PRRT3Q5FWE3 981 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 ESRP1Q6NXG1 681 aaKnown RBP7.76□□□□□ -1.17
SMG6-211ENST00000572369 LYSMD3Q7Z3D4 306 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 SLC13A5Q86YT5 568 aaPredicted RBP7.76□□□□□ -1.17
SMG6-211ENST00000572369 PHACTR4Q8IZ21 702 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 RBFAQ8N0V3 343 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 FAM71DQ8N9W8 422 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 CCDC110Q8TBZ0 833 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 MAIP1Q8WWC4 291 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 C1orf54Q8WWF1 131 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 ATG4AQ8WYN0 398 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 TSACCQ96A04 125 aaPredicted RBP7.76□□□□□ -1.17
SMG6-211ENST00000572369 FUBP1Q96AE4 644 aaKnown RBP7.76□□□□□ -1.17
SMG6-211ENST00000572369 AP2M1Q96CW1 435 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 SPATA13Q96N96 652 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 DCBLD2Q96PD2 775 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 PPP1R2P1Q96PQ5 205 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 SRPK1Q96SB4 655 aaKnown RBP7.76□□□□□ -1.17
SMG6-211ENST00000572369 TMEM121Q9BTD3 319 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 FICDQ9BVA6 458 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 ZFYVE1Q9HBF4 777 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 RAD18Q9NS91 495 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 EVA1BQ9NVM1 165 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 UCKL1Q9NWZ5 548 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 SPASTQ9UBP0 616 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 IL17BQ9UHF5 180 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 AAR2Q9Y312 384 aaKnown RBP7.76□□□□□ -1.17
SMG6-211ENST00000572369 MGAQ8IWI9 3026 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 DNHD1Q96M86 4753 aa7.76□□□□□ -1.17
SMG6-211ENST00000572369 ZFHX3Q15911 3703 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 LRBAP50851 2863 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 TCRBV7S2A1N4TA0A589 114 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 E7EVH7 732 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 K7ESM1 405 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 ENC1O14682 589 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 INPP4BO15327 924 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 TNFSF14O43557 240 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 ASMTLO95671 621 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 AGTP01019 485 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 IFNB1P01574 187 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 FGGP02679 453 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 FGF1P05230 155 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 ANXA6P08133 673 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 FTH1P19P0C7X4 201 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 MYCLP1P12525 358 aaPredicted RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 GM2AP17900 193 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 HLA-DPA1P20036 260 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 LMAN1P49257 510 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 HK3P52790 923 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 STC1P52823 247 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 KLF1Q13351 362 aaPredicted RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 C1orf61Q13536 156 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 ELOCQ15369 112 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 SLC1A5Q15758 541 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 DEFB133Q30KQ1 61 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 SIRPB2Q5JXA9 342 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 TPRG1LQ5T0D9 272 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 ALS2CLQ60I27 953 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 DOK6Q6PKX4 331 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 KDELC1Q6UW63 502 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 DBX2Q6ZNG2 339 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 GSTA5Q7RTV2 222 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 GLT6D1Q7Z4J2 308 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 TECPR1Q7Z6L1 1165 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 HEATR4Q86WZ0 1026 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 NRSN1Q8IZ57 195 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 TAB3Q8N5C8 712 aaPredicted RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 PNPLA1Q8N8W4 532 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 CCDC89Q8N998 374 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 ZNF548Q8NEK5 533 aaPredicted RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 OR56A4Q8NGH8 313 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 BLOC1S5Q8TDH9 187 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 SCG3Q8WXD2 468 aaKnown RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 SCAMP4Q969E2 229 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 OXNAD1Q96HP4 312 aaPredicted RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 TRIB3Q96RU7 358 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 DUSP23Q9BVJ7 150 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 RIOK2Q9BVS4 552 aaKnown RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 SPATA16Q9BXB7 569 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 FRMD8P1Q9BZ68 369 aaPredicted RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 ABCG8Q9H221 673 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 KCNF1Q9H3M0 494 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 FAM83DQ9H4H8 585 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 MAGEE1Q9HCI5 957 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 CYP4F12Q9HCS2 524 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 GPR27Q9NS67 375 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 NLGN3Q9NZ94 848 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 HACD3Q9P035 362 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 R3HDM2Q9Y2K5 976 aaKnown RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 ZNF711Q9Y462 761 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 JRKLQ9Y4A0 524 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 LRP4O75096 1905 aa7.75□□□□□ -1.17
SMG6-211ENST00000572369 SETD2Q9BYW2 2564 aaPredicted RBP7.75□□□□□ -1.17
SMG6-211ENST00000572369 POLQO75417 2590 aa7.74□□□□□ -1.17
SMG6-211ENST00000572369 PLXNB3Q9ULL4 1909 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms