RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 IL17CQ9P0M4 197 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 PKP3Q9Y446 797 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 GOLGA6L10A0A0M3HER8 536 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 CTAGE9A4FU28 777 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 C2orf81A6NN90 581 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 E7EVH7 732 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 ZNF185O15231 689 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 TNFSF14O43557 240 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 CRTAMO95727 393 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 LDOC1O95751 146 aaPredicted RBP16.08■□□□□ 0.16
LITAF-210ENST00000571976 CEACAM5P06731 702 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 ZSCAN5DPP0CG00 497 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 CTSEP14091 401 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 LMAN1P49257 510 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 SIM1P81133 766 aaPredicted RBP16.08■□□□□ 0.16
LITAF-210ENST00000571976 PDE1BQ01064 536 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 SEMA5AQ13591 1074 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 TAF1AQ15573 450 aaPredicted RBP16.08■□□□□ 0.16
LITAF-210ENST00000571976 CYP1B1Q16678 543 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 ALS2CLQ60I27 953 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 PDPK2PQ6A1A2 396 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 PRUNE1Q86TP1 453 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 SDR16C5Q8N3Y7 309 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 FSTL5Q8N475 847 aaPredicted RBP16.08■□□□□ 0.16
LITAF-210ENST00000571976 TRAM1L1Q8N609 369 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 GLIS1Q8NBF1 620 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 OR4C6Q8NH72 309 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 PDXPQ96GD0 296 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 COX14Q96I36 57 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 LRRC61Q9BV99 259 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 DUSP23Q9BVJ7 150 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 SPATA16Q9BXB7 569 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 FRMD8Q9BZ67 464 aaPredicted RBP16.08■□□□□ 0.16
LITAF-210ENST00000571976 CAAP1Q9H8G2 361 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 BPIFA1Q9NP55 256 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 NLGN3Q9NZ94 848 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 FTSJ1Q9UET6 329 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 SLC17A4Q9Y2C5 497 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 SAR1BQ9Y6B6 198 aa16.08■□□□□ 0.16
LITAF-210ENST00000571976 CNOT1A5YKK6 2376 aaKnown RBP16.08■□□□□ 0.16
LITAF-210ENST00000571976 PCNX2A6NKB5 2137 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 SPAARA0A1B0GVQ0 90 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 PRSS38A1L453 326 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 FADS2P1A8MWK0 482 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 TRIM38O00635 465 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 TPP1O14773 563 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 INPP4BO15327 924 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 FFAR2O15552 330 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 SUN1O94901 812 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 GIMD1P0DJR0 217 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 LPOP22079 712 aaPredicted RBP16.07■□□□□ 0.16
LITAF-210ENST00000571976 MSLNQ13421 630 aaPredicted RBP16.07■□□□□ 0.16
LITAF-210ENST00000571976 C1orf61Q13536 156 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 ELOCQ15369 112 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 TTC27Q6P3X3 843 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 DTX3LQ8TDB6 740 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 CNDP2Q96KP4 475 aaKnown RBP16.07■□□□□ 0.16
LITAF-210ENST00000571976 CYP4F12Q9HCS2 524 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 IL26Q9NPH9 171 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 MRPL40Q9NQ50 206 aaKnown RBP16.07■□□□□ 0.16
LITAF-210ENST00000571976 SMARCAL1Q9NZC9 954 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 MOSPD1Q9UJG1 213 aa16.07■□□□□ 0.16
LITAF-210ENST00000571976 CNOT6Q9ULM6 557 aaKnown RBP16.07■□□□□ 0.16
LITAF-210ENST00000571976 TDRD6O60522 2096 aaKnown RBP16.07■□□□□ 0.16
LITAF-210ENST00000571976 COL5A1P20908 1838 aaPredicted RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 LMO7DNF2Z398 122 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 STX7O15400 261 aaKnown RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 SIGLEC6O43699 453 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 BUD23O43709 281 aaKnown RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 IVLP07476 585 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 APRTP07741 180 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 COILP38432 576 aaPredicted RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 SPAM1P38567 509 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 KCTD16Q68DU8 428 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 CCDC137Q6PK04 289 aaKnown RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 NYAP1Q6ZVC0 841 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 C17orf53Q8N3J3 647 aaPredicted RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 SCARF2Q96GP6 870 aaPredicted RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 C19orf43Q9BQ61 176 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 CLPBQ9H078 707 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 CARS2Q9HA77 564 aaKnown RBP16.06■□□□□ 0.16
LITAF-210ENST00000571976 VPS18Q9P253 973 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 TMEM98Q9Y2Y6 226 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 ARL5AQ9Y689 179 aa16.06■□□□□ 0.16
LITAF-210ENST00000571976 YY2O15391 372 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 PHF2O75151 1096 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 ASMTLO95671 621 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 GAS8O95995 478 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 FUCA1P04066 466 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 ANXA6P08133 673 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 POLD2P49005 469 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 CDH17Q12864 832 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 DEFB133Q30KQ1 61 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 PROX2Q3B8N5 592 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 N4BP2L1Q5TBK1 243 aaPredicted RBP16.05■□□□□ 0.16
LITAF-210ENST00000571976 ZCCHC8Q6NZY4 707 aaKnown RBP16.05■□□□□ 0.16
LITAF-210ENST00000571976 DOK6Q6PKX4 331 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 LVRNQ6Q4G3 990 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 PPP1R21Q6ZMI0 780 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 TRIM74Q86UV6 250 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms