RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CLASP2O75122 1294 aaKnown RBP17.41■□□□□ 0.38
SCARF1-205ENST00000571272 B3GAT3O94766 335 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 MYL3P08590 195 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 PSEN2P49810 448 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 PSMD7P51665 324 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 LIPEQ05469 1076 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 CYBRD1Q53TN4 286 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 PAGE3Q5JUK9 113 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 MARC1Q5VT66 337 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 BLOC1S3Q6QNY0 202 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 SPRED1Q7Z699 444 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCARF1-205ENST00000571272 TMEM125Q96AQ2 219 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 SMPD3Q9NY59 655 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-205ENST00000571272 ZNHIT2Q9UHR6 403 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 KPNA6O60684 536 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 CRCPO75575 148 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 FGF4P08620 206 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 PRSS56P0CW18 603 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 SLC2A3P11169 496 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 RPS9P46781 194 aaKnown RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 RENBPP51606 427 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 TIAL1Q01085 375 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 BNIP3Q12983 259 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 OTUD3Q5T2D3 398 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 DCP1BQ8IZD4 617 aaKnown RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 BLOC1S5Q8TDH9 187 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 KCTD14Q9BQ13 255 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 AGO3Q9H9G7 860 aaKnown RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 ATP13A1Q9HD20 1204 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 FAM105AQ9NUU6 356 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 ARL5AQ9Y689 179 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 MMP2P08253 660 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 HMOX2P30519 316 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 RFC2P35250 354 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 CAPGP40121 348 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 NFKB2Q00653 900 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 SEMA3AQ14563 771 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 ZIK1Q3SY52 487 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 KANK2Q63ZY3 851 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 TBPL2Q6SJ96 375 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 RBM12BQ8IXT5 1001 aaKnown RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 OR10T2Q8NGX3 314 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 PSMG2Q969U7 264 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 NMUR1Q9HB89 426 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 ABCC13Q9NSE7 274 aa17.4■□□□□ 0.38
SCARF1-205ENST00000571272 OAS3Q9Y6K5 1087 aaKnown RBP17.4■□□□□ 0.38
SCARF1-205ENST00000571272 MROH6A6NGR9 719 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 ARL5CA6NH57 179 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 GOT2P00505 430 aaKnown RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 EEF1DP29692 281 aaKnown RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 PYCR3Q53H96 274 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 AFMIDQ63HM1 303 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 TLK2Q86UE8 772 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 SEZ6LQ9BYH1 1024 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 TRIM64A6NGJ6 449 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 NCF1BA6NI72 391 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 NCF1CA8MVU1 366 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 ZNF701M0R085 212 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 LDB2O43679 373 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 ATP6V1G1O75348 118 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 CNTN5O94779 1100 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 PAPSS2O95340 614 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 GPIP06744 558 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 NCF1P14598 390 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 ZNF37AP17032 561 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 FDXRP22570 491 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 EEF1B2P24534 225 aaKnown RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 PRDX3P30048 256 aaKnown RBP17.39■□□□□ 0.37
SCARF1-205ENST00000571272 PIK3R6Q5UE93 754 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 SCD5Q86SK9 330 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 C1orf50Q9BV19 199 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 SLC52A3Q9NQ40 469 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 ANAPC2Q9UJX6 822 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 CDH7Q9ULB5 785 aa17.39■□□□□ 0.37
SCARF1-205ENST00000571272 ASPDHA6ND91 283 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 SUPT3HB4E1H0 165 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 MATN4O95460 622 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 GLP2RO95838 553 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 POMCP01189 267 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 SLC26A3P40879 764 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 UFM1P61960 85 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 CLCQ05315 142 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 HABP4Q5JVS0 413 aaKnown RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 FAM171BQ6P995 826 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 LRRC43Q8N309 656 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 OR13C4Q8NGS5 318 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 TBC1D15Q8TC07 691 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 PLEKHG4BQ96PX9 1271 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 SMOC2Q9H3U7 446 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 SP110Q9HB58 689 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 CD320Q9NPF0 282 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 TBC1D23Q9NUY8 699 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 FAM50BQ9Y247 325 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 GPR45Q9Y5Y3 372 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 A0A1W2PP18 115 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 TCRBV5S2A0A599 114 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 CD3EAPO15446 510 aaKnown RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 CTSHP09668 335 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 IDO1P14902 403 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms