RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CXorf40AQ8TE69 158 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 RAB7BQ96AH8 199 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 OXNAD1Q96HP4 312 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-205ENST00000571028 FEM1CQ96JP0 617 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 FCRL5Q96RD9 977 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 APOL2Q9BQE5 337 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 FICDQ9BVA6 458 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 GBA3Q9H227 469 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 HOMER3Q9NSC5 361 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 DNAJC28Q9NX36 388 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 NCKIPSDQ9NZQ3 722 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 FAM153AQ9UHL3 310 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 TTC7AQ9ULT0 858 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-205ENST00000571028 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 COQ6Q9Y2Z9 468 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 PCDHGA8Q9Y5G5 932 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 TSPAN11A1L157 253 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 CPED1A4D0V7 1026 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 IGLON5A6NGN9 336 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
CCDC40-205ENST00000571028 SPINT1O43278 529 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 URI1O94763 535 aaPredicted RBP13.3□□□□□ -0.28
CCDC40-205ENST00000571028 TNFSF15O95150 251 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 METTL18O95568 372 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 SLC4A1P02730 911 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 PIRTP0C851 137 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 AKT2P31751 481 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
CCDC40-205ENST00000571028 TNNT3P45378 269 aaPredicted RBP13.3□□□□□ -0.28
CCDC40-205ENST00000571028 LMAN1P49257 510 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 VPS41P49754 854 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 GEMP55040 296 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 NFKB2Q00653 900 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 CDK18Q07002 472 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 ELP6Q0PNE2 266 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 CLN3Q13286 438 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 SPARCL1Q14515 664 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 TTC27Q6P3X3 843 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 ZSCAN30Q86W11 494 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 CREG2Q8IUH2 290 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 KLHL7Q8IXQ5 586 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 GLIS1Q8NBF1 620 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
CCDC40-205ENST00000571028 HCAR2Q8TDS4 363 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 PIH1D2Q8WWB5 315 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 ECHDC3Q96DC8 303 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 FSD1LQ9BXM9 530 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 PREBQ9HCU5 417 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 FZD3Q9NPG1 666 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 ANKMY1Q9P2S6 941 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 B4GALT6Q9UBX8 382 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 PHTF1Q9UMS5 762 aa13.3□□□□□ -0.28
CCDC40-205ENST00000571028 ZFR2Q9UPR6 939 aaKnown RBP13.3□□□□□ -0.28
CCDC40-205ENST00000571028 DRG1Q9Y295 367 aaKnown RBP13.3□□□□□ -0.28
CCDC40-205ENST00000571028 UBR5O95071 2799 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 PTPN13Q12923 2485 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 A0A1W2PQ67 120 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 PDE2AO00408 941 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 SCAMP1O15126 338 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 TSPAN6O43657 245 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 LZTS3O60299 673 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 FZD6O60353 706 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 GCATO75600 419 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 ANXA9O76027 345 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 AGTP01019 485 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 PRLP01236 227 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 CYP2A6P11509 494 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 RPL22P35268 128 aaKnown RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 COILP38432 576 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 CHRNA4P43681 627 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 HNRNPKP61978 463 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 SGCGQ13326 291 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 OLIG2Q13516 323 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 CDKN3Q16667 212 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 PARP6Q2NL67 630 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 P3H1Q32P28 736 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 ZCCHC8Q6NZY4 707 aaKnown RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 USP45Q70EL2 814 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 EFL1Q7Z2Z2 1120 aaKnown RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 HORMAD1Q86X24 394 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 FAM131CQ96AQ9 280 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 GORASP1Q9BQQ3 440 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 MLPHQ9BV36 600 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 ADGRE3Q9BY15 652 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 DDX47Q9H0S4 455 aaKnown RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 SYNDIG1Q9H7V2 258 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 STARD5Q9NSY2 213 aa13.29□□□□□ -0.28
CCDC40-205ENST00000571028 ATXN7L1Q9ULK2 861 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-205ENST00000571028 NPIPB15A6NHN6 443 aaPredicted RBP13.28□□□□□ -0.28
CCDC40-205ENST00000571028 CDRT15L2A8MXV6 281 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 E7EVH7 732 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 H3BM21 787 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 K7ESM1 405 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 AREL1O15033 823 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms