RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 BPIFB1Q8TDL5 484 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 BIRC7Q96CA5 298 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 ERLEC1Q96DZ1 483 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 MYOZ2Q9NPC6 264 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 RBMX2Q9Y388 322 aaKnown RBP15.37■□□□□ 0.05
SMG6-207ENST00000570756 DNAJC15Q9Y5T4 150 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 PPEF2O14830 753 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 HUS1O60921 280 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 TULP3O75386 442 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 MT-ND1P03886 318 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 CDH1P12830 882 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 ITIH1P19827 911 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 SERPINB1P30740 379 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 KCNK10P57789 538 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 HERVK_113P63132 956 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 DGUOKQ16854 277 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 Q3C1V9 767 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 RBM20Q5T481 1227 aaKnown RBP15.37■□□□□ 0.05
SMG6-207ENST00000570756 ZNF280DQ6N043 979 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 OTOP3Q7RTS5 596 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 IPMKQ8NFU5 416 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 TWIST2Q8WVJ9 160 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 ZMAT2Q96NC0 199 aaKnown RBP15.37■□□□□ 0.05
SMG6-207ENST00000570756 ERVK-6Q9BXR3 956 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 PRKD2Q9BZL6 878 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 EHD1Q9H4M9 534 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 VTA1Q9NP79 307 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 FBXO8Q9NRD0 319 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 IFT52Q9Y366 437 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 M0R3G1 203 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 CACNG3O60359 315 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 VPS4BO75351 444 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 FGF4P08620 206 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 TSPAN8P19075 237 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 HTR1EP28566 365 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ZNF135P52742 658 aaPredicted RBP15.36■□□□□ 0.05
SMG6-207ENST00000570756 TPTEP56180 551 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 NFKB2Q00653 900 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 DNASE1L3Q13609 305 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 CTF1Q16619 201 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 PGS1Q32NB8 556 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ARL13BQ3SXY8 428 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 RABL3Q5HYI8 236 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 C6orf141Q5SZD1 244 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 DLK2Q6UY11 383 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 GPC2Q8N158 579 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMG6-207ENST00000570756 SMG8Q8ND04 991 aaKnown RBP15.36■□□□□ 0.05
SMG6-207ENST00000570756 ZNF555Q8NEP9 628 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ZFP90Q8TF47 636 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 SLC22A17Q8WUG5 538 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 TUBGCP3Q96CW5 907 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 SLC2A13Q96QE2 648 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 TRPV5Q9NQA5 729 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 TREX1Q9NSU2 369 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 OAS3Q9Y6K5 1087 aaKnown RBP15.36■□□□□ 0.05
SMG6-207ENST00000570756 AZIN1O14977 448 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 PIP5K1BO14986 540 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 HCRTO43612 131 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 IL7RP16871 459 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 SLC26A3P40879 764 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ECT2LQ008S8 904 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ZNF33AQ06730 810 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ILF2Q12905 390 aaKnown RBP15.36■□□□□ 0.05
SMG6-207ENST00000570756 GRB7Q14451 532 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 SLC14A2Q15849 920 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 UNC50Q53HI1 259 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 C6orf183Q5T699 404 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 SYPL2Q5VXT5 272 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 SCML4Q8N228 414 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 BEST2Q8NFU1 509 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 NSMCE2Q96MF7 247 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 PPP1R2P1Q96PQ5 205 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 ALG9Q9H6U8 611 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 PLEKHA5Q9HAU0 1116 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 DNMT3BQ9UBC3 853 aaKnown RBP15.36■□□□□ 0.05
SMG6-207ENST00000570756 SLC2A6Q9UGQ3 507 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 SUN2Q9UH99 717 aa15.36■□□□□ 0.05
SMG6-207ENST00000570756 C9JVG2 144 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 TNPO2O14787 897 aaKnown RBP15.35■□□□□ 0.05
SMG6-207ENST00000570756 C22orf31O95567 290 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 HGFP14210 728 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 NR4A1P22736 598 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 IFITM3Q01628 133 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 SELENBP1Q13228 472 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 INAVAQ3KP66 663 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
SMG6-207ENST00000570756 CATSPER4Q7RTX7 472 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 RAB44Q7Z6P3 723 aaPredicted RBP15.35■□□□□ 0.05
SMG6-207ENST00000570756 STK32CQ86UX6 486 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 PHYKPLQ8IUZ5 450 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 SPATA22Q8NHS9 363 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 TMBIM1Q969X1 311 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 TSGA13Q96PP4 275 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 PPP1R16BQ96T49 567 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 FICDQ9BVA6 458 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 TRIM8Q9BZR9 551 aa15.35■□□□□ 0.05
SMG6-207ENST00000570756 MOV10Q9HCE1 1003 aaKnown RBP15.35■□□□□ 0.05
SMG6-207ENST00000570756 CPNE5Q9HCH3 593 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms