RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 GOLGA6CA6NDK9 693 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 GOLGA6BA6NDN3 693 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 FOXN3O00409 490 aaPredicted RBP10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 TRAFD1O14545 582 aaPredicted RBP10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 C9P02748 559 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 GOLGA6DP0CG33 693 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 FGF5P12034 268 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 TEAD1P28347 426 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 EPHB2P29323 1055 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 ETV3P41162 512 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 SEPHS1P49903 392 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 ITGA1P56199 1179 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 BCL2L1Q07817 233 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 IL10RAQ13651 578 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 LAMB3Q13751 1172 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 PARP15Q460N3 678 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 PLEKHN1Q494U1 663 aaPredicted RBP10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 RAET1GQ6H3X3 334 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 ISM2Q6H9L7 571 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 IYDQ6PHW0 289 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 MARK2Q7KZI7 788 aaKnown RBP10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 HSD11B1LQ7Z5J1 315 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 PLXDC1Q8IUK5 500 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 PYROXD2Q8N2H3 581 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 CISD2Q8N5K1 135 aaKnown RBP10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 FDCSPQ8NFU4 85 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 FNIP1Q8TF40 1166 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 SEC14L1Q92503 715 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 SH3KBP1Q96B97 665 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 NUDT9Q9BW91 350 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 BRD8Q9H0E9 1235 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 METTL5Q9NRN9 209 aaKnown RBP10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 KCTD5Q9NXV2 234 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 GOLGA6AQ9NYA3 693 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 OGFRQ9NZT2 677 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 PCYT1BQ9Y5K3 369 aaPredicted RBP10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 DCHS2Q6V1P9 2916 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 PCNX1Q96RV3 2341 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 TACC2O95359 2948 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PCSK5Q92824 1860 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PKDREJQ9NTG1 2253 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 WASH4PA8MWX3 477 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PRAMEF11O60813 436 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 HEXIM1O94992 359 aaKnown RBP10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 TIAF1O95411 115 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 SOD1P00441 154 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 MT-ND3P03897 115 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PTPN4P29074 926 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 VIPR1P32241 457 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PTGIRP43119 386 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 STIM1Q13586 685 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 ZXDCQ2QGD7 858 aaPredicted RBP10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 KLHL10Q6JEL2 608 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 FAM199XQ6PEV8 388 aaPredicted RBP10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 Q6ZVL8 140 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 TRIM74Q86UV6 250 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 HPS6Q86YV9 775 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 RHOT1Q8IXI2 618 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 UMODL1-AS1Q8N2C9 162 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PAF1Q8N7H5 531 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 GPT2Q8TD30 523 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 RXFP2Q8WXD0 754 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 GPR87Q9BY21 358 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PDCL3Q9H2J4 239 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 EPB41L1Q9H4G0 881 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 LRRC19Q9H756 370 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 TBC1D29Q9UFV1 150 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 PHTF1Q9UMS5 762 aa10.34□□□□□ -0.75
CTDNEP1-202ENST00000570380 SPTBP11277 2137 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 MYO7BQ6PIF6 2116 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 GNA14O95837 355 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 TNFAIP3P21580 790 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 LHCGRP22888 699 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 PON1P27169 355 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 SDC4P31431 198 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 GPR1P46091 355 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 HDAC4P56524 1084 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 KRT85P78386 507 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 CDK18Q07002 472 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 LRP8Q14114 963 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 ELOAQ14241 798 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 PTPRRQ15256 657 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 ZRSR2Q15696 482 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 RFLNAQ6ZTI6 216 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 STRADAQ7RTN6 431 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 SYVN1Q86TM6 617 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 SLC9B2Q86UD5 537 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 GALNT13Q8IUC8 556 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 FAM71AQ8IYT1 594 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 JOSD2Q8TAC2 188 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 NELFBQ8WX92 580 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 CPA5Q8WXQ8 436 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 CENPIQ92674 756 aaPredicted RBP10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 SMARCE1Q969G3 411 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 NTAN1Q96AB6 310 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 TGM7Q96PF1 710 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms